Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LRRC40Q9H9A6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRRC40Q9H9A6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.15□□□□□ -1.9
LRRC40Q9H9A6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 SNORD15B-201ENST00000384714 146 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 MIR7-3-201ENST00000384898 110 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 MCTS2P-201ENST00000394552 546 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC027644.1-201ENST00000419595 298 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AL137014.1-201ENST00000420490 1226 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 MRPL42P4-201ENST00000453267 443 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AL031183.1-201ENST00000457667 207 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 RN7SL601P-201ENST00000471221 293 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AL606834.2-201ENST00000602954 668 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 RPL23AP92-201ENST00000603609 255 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 PRELID3BP8-201ENST00000604148 295 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC091946.2-201ENST00000606105 291 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRRC40Q9H9A6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 RNU6-1300P-201ENST00000391046 108 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 RPL7P25-201ENST00000404151 721 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 VN1R10P-201ENST00000447106 875 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AL359385.1-201ENST00000456509 365 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 RN7SL75P-201ENST00000461926 281 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC092757.1-201ENST00000467293 467 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 RPL32P34-201ENST00000486380 400 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 POU5F1P7-201ENST00000508759 541 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC108043.1-201ENST00000512696 574 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC055876.1-202ENST00000567053 138 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 MIR5680-201ENST00000577577 84 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 CCDC58P3-201ENST00000590792 430 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AL031985.2-201ENST00000600955 480 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC012314.7-201ENST00000619693 93 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC099506.2-201ENST00000623074 221 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC073592.7-201ENST00000623659 507 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 AC018692.3-201ENST00000623929 123 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LRRC40Q9H9A6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 RNA5SP72-201ENST00000364442 117 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 RNA5SP252-201ENST00000391131 119 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 RNA5SP274-201ENST00000410484 108 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 RNU2-47P-201ENST00000410649 186 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AL353678.1-201ENST00000422735 741 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 RPL23AP69-201ENST00000431134 458 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AC091862.1-201ENST00000438016 1100 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 RAC1P7-201ENST00000445367 377 ntBASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRC40Q9H9A6 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms