Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RNU7-187P-201ENST00000458985 68 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 SNORA59A-201ENST00000459326 152 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AC010618.1-201ENST00000469924 477 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RNU6-685P-201ENST00000517088 95 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AC144568.1-201ENST00000520139 137 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 MIR3189-201ENST00000578735 73 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 MIR4715-201ENST00000584117 79 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AC090607.5-201ENST00000615692 224 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AL590240.4-201ENST00000616908 390 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 U6.106-201ENST00000636360 105 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 MAPK10-323ENST00000641493 3207 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AC100757.1-201ENST00000616872 1835 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.16-201ENST00000362421 102 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 RNA5SP258-201ENST00000362750 119 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.76-201ENST00000362931 109 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 SNORA73.1-201ENST00000363107 205 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 RN7SKP224-201ENST00000364140 325 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 MIR625-201ENST00000385047 85 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 U3.39-201ENST00000408569 239 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 RNU6-174P-201ENST00000410406 106 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 RNU4-78P-201ENST00000410940 126 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 SYF2P2-201ENST00000417620 583 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 CALM2P2-201ENST00000428512 440 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AC087650.1-201ENST00000431445 468 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 RAC1P7-201ENST00000445367 377 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 snoU13.8-201ENST00000458890 104 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AC021074.2-201ENST00000468434 172 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 RPS4XP20-201ENST00000505751 772 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 COX6B1P5-201ENST00000509843 249 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AC016559.2-201ENST00000510759 359 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 IGKV1-32-201ENST00000519290 311 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 MIR3158-1-201ENST00000583596 81 ntBASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.66□□□□□ -1.5
COL25A1Q9BXS0 AL133243.4-201ENST00000623116 3109 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AP000866.6-201ENST00000638898 3579 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 AC006484.1-201ENST00000435086 1884 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 RNY1P16-201ENST00000363063 111 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 RNU6-596P-201ENST00000365395 98 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.353-201ENST00000365440 108 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.383-201ENST00000383855 97 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 SNORD115-46-201ENST00000390982 71 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 SNORA53-201ENST00000391141 249 ntBASIC5.65□□□□□ -1.5
COL25A1Q9BXS0 U3.30-201ENST00000391308 210 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms