Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK1Q96PY6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEK1Q96PY6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK1Q96PY6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK1Q96PY6 MIR607-201ENST00000385241 96 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEK1Q96PY6 OFD1P18Y-201ENST00000420889 959 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC104073.1-201ENST00000451988 151 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 TRBV26-201ENST00000456572 344 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC087312.1-201ENST00000471411 480 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 RPL31P13-201ENST00000484151 370 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC093663.1-201ENST00000497190 394 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 HMGB3P15-201ENST00000507326 574 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC109445.1-201ENST00000512356 383 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC112673.1-201ENST00000513168 575 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 MIR5186-201ENST00000577504 120 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC025588.3-201ENST00000604182 274 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 AC231759.1-201ENST00000616455 597 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 AL356321.1-201ENST00000621360 228 ntBASIC3.97□□□□□ -1.77
NEK1Q96PY6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK1Q96PY6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK1Q96PY6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK1Q96PY6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK1Q96PY6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NEK1Q96PY6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEK1Q96PY6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEK1Q96PY6 RNU6-83P-201ENST00000384568 112 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 MIR490-201ENST00000384865 128 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 SNRPEP2-201ENST00000397592 279 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 AL121972.1-201ENST00000402023 252 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC096664.2-201ENST00000411843 406 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 EI24P1-201ENST00000416584 867 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 USP9YP11-201ENST00000427537 717 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEK1Q96PY6 VN1R10P-201ENST00000447106 875 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 NCOR1P1-202ENST00000486162 291 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 KLRA1P-201ENST00000503499 986 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 RN7SKP116-201ENST00000516902 319 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 Y_RNA.717-201ENST00000517106 92 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC008127.2-201ENST00000549925 1075 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEK1Q96PY6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEK1Q96PY6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC120349.2-201ENST00000625002 298 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 AL359893.1-201ENST00000447628 1580 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC007496.3-201ENST00000624987 3443 ntBASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEK1Q96PY6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.96□□□□□ -1.78
NEK1Q96PY6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.95□□□□□ -1.78
NEK1Q96PY6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.95□□□□□ -1.78
NEK1Q96PY6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEK1Q96PY6 MT-TC-201ENST00000387405 66 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 RNA5SP31-201ENST00000411144 127 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 HSFY4P-201ENST00000415994 1181 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 AC006960.1-201ENST00000419980 153 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.95□□□□□ -1.78
NEK1Q96PY6 AL139421.1-201ENST00000423010 169 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 AC010099.3-201ENST00000423896 409 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 AL035410.1-201ENST00000427409 427 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.95□□□□□ -1.78
NEK1Q96PY6 AL662791.1-201ENST00000441992 928 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 AC092754.2-201ENST00000463506 460 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 AC021146.5-201ENST00000503544 545 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 AC034244.1-201ENST00000507687 207 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 HMGB1P28-201ENST00000507778 552 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 AC079395.1-201ENST00000510981 262 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 RNU1-103P-201ENST00000516502 125 ntBASIC3.95□□□□□ -1.78
NEK1Q96PY6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms