Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC068533.1-201ENST00000418542 415 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 BX276092.6-201ENST00000430476 250 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC138761.5-201ENST00000433967 325 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 CHEK2P4-201ENST00000450340 246 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 BX276092.8-201ENST00000455722 250 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 RN7SL346P-201ENST00000491561 294 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC011005.3-201ENST00000491624 395 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC093852.1-201ENST00000503587 266 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 TMEM251P1-201ENST00000503717 318 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC018552.1-201ENST00000562099 811 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 CYP4F35P-202ENST00000636121 390 ntBASIC6.32□□□□□ -1.4
TRIM47Q96LD4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM47Q96LD4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC244517.1-201ENST00000606030 2086 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 Y_RNA.2-201ENST00000362330 96 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 RN7SKP185-201ENST00000362813 326 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC013442.1-201ENST00000397347 228 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 RNU2-33P-201ENST00000410344 192 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC011933.1-201ENST00000413334 321 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 USP9YP30-201ENST00000430729 455 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AL031659.1-201ENST00000447075 539 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 FCF1P4-201ENST00000448326 183 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 PSMC1P13-201ENST00000458195 985 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 LINC01399-202ENST00000458450 244 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 RPS15AP17-201ENST00000470598 390 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC105758.1-201ENST00000506038 399 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 RNU6-307P-201ENST00000516743 106 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 RNU6-897P-201ENST00000517135 105 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC092490.3-201ENST00000545370 572 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC137627.1-201ENST00000545761 289 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC022884.2-201ENST00000578535 580 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 RN7SL52P-201ENST00000584271 284 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 RN7SL722P-201ENST00000617780 284 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 RN7SL565P-201ENST00000618246 284 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC073869.10-201ENST00000642016 354 ntBASIC6.31□□□□□ -1.4
TRIM47Q96LD4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM47Q96LD4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RNU6-251P-201ENST00000363235 104 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 Y_RNA.352-201ENST00000365439 102 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 DHFRP6-201ENST00000401776 268 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RNU2-25P-201ENST00000411041 191 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AC096921.1-201ENST00000411661 375 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RPL21P38-201ENST00000418090 167 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AC091390.1-201ENST00000433904 331 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 HIGD1AP11-201ENST00000438361 280 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AC005297.2-201ENST00000450430 606 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM47Q96LD4 RPL9P32-201ENST00000464118 620 ntBASIC6.3□□□□□ -1.4
TRIM47Q96LD4 AC087879.1-201ENST00000474343 374 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms