Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNED1Q8TER0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 AC117440.1-201ENST00000474107 571 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AC068724.1-201ENST00000487100 792 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 RPS6P4-201ENST00000494693 758 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 MIR4319-201ENST00000577285 85 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 MTATP6P3-201ENST00000581686 676 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 RN7SL622P-201ENST00000585292 275 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 AL020997.3-201ENST00000602843 359 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AP000254.1-201ENST00000609934 520 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 AL450472.3-201ENST00000615578 367 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AP004607.9-201ENST00000618202 316 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AC073534.2-201ENST00000620377 381 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 AC134882.1-201ENST00000603738 1676 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 FAM133CP-201ENST00000332869 704 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 SNORD67-201ENST00000390833 111 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 MCTS2P-201ENST00000394552 546 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 AL021407.1-201ENST00000404531 386 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 AL590084.1-201ENST00000407885 387 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 Y_RNA.604-201ENST00000410574 102 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 XKRYP4-201ENST00000414395 483 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 AC093156.1-201ENST00000440382 670 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 FGF7P5-201ENST00000441829 291 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 BMI1P1-201ENST00000445879 941 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 XKRYP5-201ENST00000449659 483 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 AL645939.1-201ENST00000453429 797 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 SYPL1P1-201ENST00000473622 768 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 ARL2BPP6-201ENST00000512757 439 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 AC009812.2-201ENST00000517657 457 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 POLR2KP1-201ENST00000553226 168 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 AC015688.2-201ENST00000584523 262 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNED1Q8TER0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 SUMO2P14-201ENST00000604488 293 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 uc_338.1-201ENST00000612113 180 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 uc_338.32-201ENST00000615087 172 ntBASIC3.81□□□□□ -1.8
SNED1Q8TER0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNED1Q8TER0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNED1Q8TER0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.81□□□□□ -1.8
SNED1Q8TER0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNED1Q8TER0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNED1Q8TER0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNED1Q8TER0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNED1Q8TER0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNED1Q8TER0 RN7SKP44-201ENST00000363602 316 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 RNU4-51P-201ENST00000364206 140 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 RNU4-75P-201ENST00000364621 146 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 RPL7P8-201ENST00000411964 730 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 PNRC2P1-201ENST00000423940 420 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 NPM1P49-201ENST00000448027 714 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 NDUFS5P3-201ENST00000450668 321 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC105185.1-201ENST00000518705 535 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC138393.1-206ENST00000540997 1886 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC007115.1-201ENST00000546853 234 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 ELOCP32-201ENST00000548625 324 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC011611.5-201ENST00000552477 578 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC012254.4-201ENST00000588843 273 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.8□□□□□ -1.8
SNED1Q8TER0 RN7SKP299-201ENST00000606679 301 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC013468.1-201ENST00000608680 598 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AC009237.15-201ENST00000610252 501 ntBASIC3.8□□□□□ -1.8
SNED1Q8TER0 AL450489.1-201ENST00000612071 468 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms