Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC074250.1-201ENST00000511117 192 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 RNA5SP208-201ENST00000516156 78 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 RANP9-201ENST00000519957 271 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 MIR3915-201ENST00000578518 97 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 VN1R79P-201ENST00000593540 513 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 U73479.1-201ENST00000618062 168 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC018816.2-201ENST00000621460 353 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC006065.5-201ENST00000623427 349 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC099063.3-201ENST00000642066 185 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 NUP58P1-201ENST00000502546 1738 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP41Q3LFD5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 MTCO1P24-201ENST00000515438 1558 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 RNU6-433P-201ENST00000363216 104 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 RNU6-289P-201ENST00000364093 107 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 RNU6-878P-201ENST00000384578 110 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 RNU6-952P-201ENST00000391164 108 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 PTMAP5-201ENST00000393073 333 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AL021407.1-201ENST00000404531 386 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 TPMTP2-201ENST00000414372 726 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 FNDC3CP-201ENST00000420795 1155 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AL365338.1-201ENST00000422282 858 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AP000907.1-201ENST00000428428 510 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 CYCSP4-201ENST00000429682 331 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC073063.1-201ENST00000434352 607 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 SNRPEP7-201ENST00000438350 220 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC092641.1-201ENST00000440229 772 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 RPS3AP12-201ENST00000443616 753 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC097262.1-201ENST00000452559 548 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC010468.1-201ENST00000461022 817 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 RN7SKP13-201ENST00000515933 244 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 RNA5SP216-201ENST00000516111 123 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AL356057.1-201ENST00000533798 831 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC024224.1-201ENST00000538284 609 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
USP41Q3LFD5 AL392088.2-201ENST00000637607 285 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AP000553.6-201ENST00000641242 118 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 AL356473.1-201ENST00000406203 1408 ntBASIC3.93□□□□□ -1.78
USP41Q3LFD5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP41Q3LFD5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP41Q3LFD5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP41Q3LFD5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 RNU6-500P-201ENST00000362349 107 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 SNORD9-201ENST00000362566 104 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 RNU6-263P-201ENST00000363811 107 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 RNU4-40P-201ENST00000364351 143 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AL031577.2-201ENST00000404133 280 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 MIR320C1-201ENST00000408566 88 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC245054.1-201ENST00000420944 258 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP41Q3LFD5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC098824.1-201ENST00000453565 980 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC117522.2-201ENST00000510049 657 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 RN7SKP116-201ENST00000516902 319 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 RNU4-60P-201ENST00000517239 135 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 SUMO2P20-201ENST00000520803 283 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AL121766.1-201ENST00000547436 487 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms