Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.57□□□□□ -1.68
RHBDL3P58872 RPL30P9-201ENST00000465586 330 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 MTCYBP35-201ENST00000503630 1137 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AC021678.1-201ENST00000505195 936 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.57□□□□□ -1.68
RHBDL3P58872 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDL3P58872 IGKV2-23-201ENST00000518729 323 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDL3P58872 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDL3P58872 AP001804.3-201ENST00000525146 880 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 MTATP6P15-201ENST00000527233 835 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDL3P58872 AP004247.1-201ENST00000531556 1289 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDL3P58872 SYF2P1-201ENST00000550658 413 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.57□□□□□ -1.68
RHBDL3P58872 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 VN1R90P-201ENST00000595717 726 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.57□□□□□ -1.68
RHBDL3P58872 BNIP3P23-201ENST00000599655 511 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 ELOCP35-201ENST00000604289 336 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AL158211.4-201ENST00000606988 584 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AP002826.1-201ENST00000608835 315 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.57□□□□□ -1.68
RHBDL3P58872 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.57□□□□□ -1.68
RHBDL3P58872 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.57□□□□□ -1.68
RHBDL3P58872 AC055839.1-201ENST00000634467 498 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AC099063.3-201ENST00000642066 185 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
RHBDL3P58872 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.57□□□□□ -1.68
RHBDL3P58872 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
RHBDL3P58872 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.57□□□□□ -1.68
RHBDL3P58872 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RHBDL3P58872 AC002546.1-201ENST00000588041 2504 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDL3P58872 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDL3P58872 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RHBDL3P58872 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDL3P58872 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDL3P58872 DEFB108F-201ENST00000344638 222 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 RNU1-108P-201ENST00000362556 161 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 RNY4P24-201ENST00000362735 96 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AP000567.1-201ENST00000406413 156 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AC092447.3-201ENST00000426027 686 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 YME1L1P1-201ENST00000429435 297 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AL590103.1-201ENST00000434488 307 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AC104308.1-201ENST00000454621 333 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 CFTRP1-201ENST00000456646 183 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDL3P58872 HMGB1P36-201ENST00000487709 576 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 NIPA2P2-201ENST00000496376 1083 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDL3P58872 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AC006499.5-201ENST00000505037 514 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDL3P58872 RN7SKP13-201ENST00000515933 244 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AC026407.1-201ENST00000518369 204 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 MYL12AP1-201ENST00000518490 515 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AC022695.1-201ENST00000522089 237 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDL3P58872 DEFB108D-201ENST00000527787 222 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDL3P58872 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDL3P58872 GNRHR2P1-201ENST00000555315 631 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 MED28P6-201ENST00000558776 231 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDL3P58872 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AP001004.1-201ENST00000582468 324 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AC069200.1-201ENST00000609511 323 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDL3P58872 AF117829.1-206ENST00000621883 3802 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AL159972.1-201ENST00000625150 448 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AC244258.1-201ENST00000637553 1071 ntBASIC4.56□□□□□ -1.68
RHBDL3P58872 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDL3P58872 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDL3P58872 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDL3P58872 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDL3P58872 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.55□□□□□ -1.68
RHBDL3P58872 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RHBDL3P58872 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDL3P58872 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.55□□□□□ -1.68
RHBDL3P58872 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDL3P58872 RNU6-433P-201ENST00000363216 104 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 RNA5SP51-201ENST00000364750 119 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDL3P58872 MIR1290-201ENST00000408735 78 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 SSXP9-201ENST00000417503 292 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 AL035423.1-201ENST00000420331 213 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 MTND1P20-201ENST00000430341 950 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 SETP5-201ENST00000437270 562 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms