Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC034236.1-201ENST00000469891 373 ntBASIC3.03□□□□□ -1.92
LIM2P55344 RPS15AP17-201ENST00000470598 390 ntBASIC3.03□□□□□ -1.92
LIM2P55344 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.03□□□□□ -1.92
LIM2P55344 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.03□□□□□ -1.92
LIM2P55344 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.03□□□□□ -1.92
LIM2P55344 AC010625.1-201ENST00000511296 403 ntBASIC3.03□□□□□ -1.92
LIM2P55344 NDUFB4P9-201ENST00000511646 388 ntBASIC3.03□□□□□ -1.92
LIM2P55344 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LIM2P55344 AL132857.1-201ENST00000555180 708 ntBASIC3.03□□□□□ -1.92
LIM2P55344 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LIM2P55344 AL132657.2-201ENST00000564417 358 ntBASIC3.03□□□□□ -1.92
LIM2P55344 ZNF192P1-203ENST00000565888 810 ntBASIC3.03□□□□□ -1.92
LIM2P55344 MIR5680-201ENST00000577577 84 ntBASIC3.03□□□□□ -1.92
LIM2P55344 OR4K7P-201ENST00000580232 945 ntBASIC3.03□□□□□ -1.92
LIM2P55344 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
LIM2P55344 AC015688.2-201ENST00000584523 262 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.03□□□□□ -1.92
LIM2P55344 AP001269.3-201ENST00000588718 329 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.03□□□□□ -1.92
LIM2P55344 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.03□□□□□ -1.92
LIM2P55344 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.03□□□□□ -1.92
LIM2P55344 AC055876.5-201ENST00000605667 259 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC106052.1-201ENST00000608029 497 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.03□□□□□ -1.92
LIM2P55344 AL157392.4-201ENST00000609756 345 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AL590282.1-201ENST00000610379 1136 ntBASIC3.03□□□□□ -1.92
LIM2P55344 uc_338.25-201ENST00000613756 156 ntBASIC3.03□□□□□ -1.92
LIM2P55344 MIR7112-201ENST00000616126 65 ntBASIC3.03□□□□□ -1.92
LIM2P55344 U6.101-201ENST00000637707 76 ntBASIC3.03□□□□□ -1.92
LIM2P55344 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.03□□□□□ -1.92
LIM2P55344 AL049780.3-201ENST00000624612 1583 ntBASIC3.03□□□□□ -1.92
LIM2P55344 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
LIM2P55344 AL390862.1-201ENST00000635467 1469 ntBASIC3.03□□□□□ -1.93
LIM2P55344 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LIM2P55344 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LIM2P55344 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LIM2P55344 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.02□□□□□ -1.93
LIM2P55344 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
LIM2P55344 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
LIM2P55344 RNU6-263P-201ENST00000363811 107 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LIM2P55344 RNA5SP80-201ENST00000410475 111 ntBASIC3.02□□□□□ -1.93
LIM2P55344 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LIM2P55344 MTCO2P23-201ENST00000425216 680 ntBASIC3.02□□□□□ -1.93
LIM2P55344 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.02□□□□□ -1.93
LIM2P55344 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.02□□□□□ -1.93
LIM2P55344 MTND2P19-201ENST00000449129 1012 ntBASIC3.02□□□□□ -1.93
LIM2P55344 ELOCP23-201ENST00000452014 332 ntBASIC3.02□□□□□ -1.93
LIM2P55344 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.02□□□□□ -1.93
LIM2P55344 snoU13.24-201ENST00000458998 104 ntBASIC3.02□□□□□ -1.93
LIM2P55344 HMGB1P25-201ENST00000468402 607 ntBASIC3.02□□□□□ -1.93
LIM2P55344 RN7SL807P-201ENST00000470923 297 ntBASIC3.02□□□□□ -1.93
LIM2P55344 MTCO3P35-201ENST00000485582 781 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.02□□□□□ -1.93
LIM2P55344 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.02□□□□□ -1.93
LIM2P55344 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.02□□□□□ -1.93
LIM2P55344 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
LIM2P55344 AC109635.4-202ENST00000531666 412 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AC018630.1-201ENST00000541376 925 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.02□□□□□ -1.93
LIM2P55344 AC037471.2-201ENST00000564941 598 ntBASIC3.02□□□□□ -1.93
LIM2P55344 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.02□□□□□ -1.93
LIM2P55344 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.02□□□□□ -1.93
LIM2P55344 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.02□□□□□ -1.93
LIM2P55344 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.02□□□□□ -1.93
LIM2P55344 BNIP3P33-201ENST00000598912 569 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AL031985.2-201ENST00000600955 480 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.02□□□□□ -1.93
LIM2P55344 AC004987.4-201ENST00000603383 338 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AC009220.3-201ENST00000604318 586 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.02□□□□□ -1.93
LIM2P55344 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.02□□□□□ -1.93
LIM2P55344 AC092650.2-201ENST00000619984 902 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AC048347.1-201ENST00000624621 427 ntBASIC3.02□□□□□ -1.93
LIM2P55344 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
LIM2P55344 MIR1322-201ENST00000638013 71 ntBASIC3.02□□□□□ -1.93
LIM2P55344 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
LIM2P55344 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.02□□□□□ -1.93
LIM2P55344 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LIM2P55344 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.01□□□□□ -1.93
LIM2P55344 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
LIM2P55344 MTND5P1-201ENST00000445440 1375 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AC097714.1-201ENST00000511272 1647 ntBASIC3.01□□□□□ -1.93
LIM2P55344 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LIM2P55344 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
LIM2P55344 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
LIM2P55344 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIM2P55344 RNU6-1249P-201ENST00000363237 111 ntBASIC3.01□□□□□ -1.93
LIM2P55344 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIM2P55344 RNU6-1122P-201ENST00000384449 107 ntBASIC3.01□□□□□ -1.93
LIM2P55344 PTMAP5-201ENST00000393073 333 ntBASIC3.01□□□□□ -1.93
LIM2P55344 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LIM2P55344 RNU4-47P-201ENST00000410876 114 ntBASIC3.01□□□□□ -1.93
LIM2P55344 RAD23BP2-201ENST00000416003 1207 ntBASIC3.01□□□□□ -1.93
LIM2P55344 PTP4A1P5-201ENST00000420305 455 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AL353705.1-201ENST00000433468 480 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AC006028.1-201ENST00000438379 402 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.01□□□□□ -1.93
LIM2P55344 TRGVB-201ENST00000453257 471 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AC092155.2-201ENST00000454675 477 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms