Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH11P55287 MTND4P16-201ENST00000466108 1367 ntBASIC3.5□□□□□ -1.85
CDH11P55287 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH11P55287 MAPK10-372ENST00000641954 3413 ntBASIC3.5□□□□□ -1.85
CDH11P55287 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
CDH11P55287 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 DCAF13P1-201ENST00000495256 1330 ntBASIC3.49□□□□□ -1.85
CDH11P55287 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 RNU6-289P-201ENST00000364093 107 ntBASIC3.49□□□□□ -1.85
CDH11P55287 RNU6-878P-201ENST00000384578 110 ntBASIC3.49□□□□□ -1.85
CDH11P55287 RPS3AP26-201ENST00000398259 784 ntBASIC3.49□□□□□ -1.85
CDH11P55287 RNU6ATAC-201ENST00000408749 126 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH11P55287 AC016907.1-201ENST00000419483 435 ntBASIC3.49□□□□□ -1.85
CDH11P55287 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 MTCO2P5-201ENST00000422621 426 ntBASIC3.49□□□□□ -1.85
CDH11P55287 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 AC006548.1-201ENST00000427470 102 ntBASIC3.49□□□□□ -1.85
CDH11P55287 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 SKP1P1-201ENST00000438081 489 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH11P55287 MTND1P30-201ENST00000441241 901 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 AC009961.3-201ENST00000449832 765 ntBASIC3.49□□□□□ -1.85
CDH11P55287 RPS11P1-201ENST00000451072 473 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 snoU13.3-201ENST00000459441 104 ntBASIC3.49□□□□□ -1.85
CDH11P55287 RN7SL542P-201ENST00000467147 294 ntBASIC3.49□□□□□ -1.85
CDH11P55287 RPL7L1P8-201ENST00000469911 741 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH11P55287 HMGB1P36-201ENST00000487709 576 ntBASIC3.49□□□□□ -1.85
CDH11P55287 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 RPS4XP15-201ENST00000489210 795 ntBASIC3.49□□□□□ -1.85
CDH11P55287 RPL21P129-201ENST00000491732 478 ntBASIC3.49□□□□□ -1.85
CDH11P55287 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 DSTNP2-201ENST00000504533 515 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH11P55287 MTCO3P28-201ENST00000513351 515 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 RN7SKP209-201ENST00000516888 304 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 SUMO2P20-201ENST00000520803 283 ntBASIC3.49□□□□□ -1.85
CDH11P55287 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDH11P55287 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 AC007115.1-201ENST00000546853 234 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 MIR5186-201ENST00000577504 120 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 AL353997.4-201ENST00000586196 166 ntBASIC3.49□□□□□ -1.85
CDH11P55287 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH11P55287 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH11P55287 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH11P55287 LLPHP1-201ENST00000603571 367 ntBASIC3.49□□□□□ -1.85
CDH11P55287 RNA5SP108-201ENST00000605921 117 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC090186.1-201ENST00000605991 572 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AL031775.1-201ENST00000607014 887 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC097468.3-201ENST00000607956 456 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH11P55287 AC008443.7-201ENST00000622195 246 ntBASIC3.49□□□□□ -1.85
CDH11P55287 AC006065.5-201ENST00000623427 349 ntBASIC3.49□□□□□ -1.85
CDH11P55287 CR381572.1-201ENST00000625098 102 ntBASIC3.49□□□□□ -1.85
CDH11P55287 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 CEP170P1-201ENST00000502249 4587 ntBASIC3.49□□□□□ -1.85
CDH11P55287 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH11P55287 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CDH11P55287 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 AP002001.2-201ENST00000529025 1469 ntBASIC3.48□□□□□ -1.85
CDH11P55287 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH11P55287 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.48□□□□□ -1.85
CDH11P55287 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 RNU6-761P-201ENST00000384148 107 ntBASIC3.48□□□□□ -1.85
CDH11P55287 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.48□□□□□ -1.85
CDH11P55287 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH11P55287 CYCSP46-201ENST00000423569 204 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AL365184.2-201ENST00000431139 435 ntBASIC3.48□□□□□ -1.85
CDH11P55287 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.48□□□□□ -1.85
CDH11P55287 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH11P55287 MTCYBP45-201ENST00000435243 565 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms