Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL049734.2-201ENST00000441066 616 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.36□□□□□ -1.71
NEK3P51956 RNU7-59P-201ENST00000459101 61 ntBASIC4.36□□□□□ -1.71
NEK3P51956 RPL35AP15-201ENST00000468042 339 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.36□□□□□ -1.71
NEK3P51956 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 RPS26P15-201ENST00000488067 348 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AC055855.1-201ENST00000489563 579 ntBASIC4.36□□□□□ -1.71
NEK3P51956 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 AC080014.1-201ENST00000496877 1201 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AC025554.1-201ENST00000505641 188 ntBASIC4.36□□□□□ -1.71
NEK3P51956 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 AC020593.1-201ENST00000507399 299 ntBASIC4.36□□□□□ -1.71
NEK3P51956 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 SNORA31.9-201ENST00000516429 84 ntBASIC4.36□□□□□ -1.71
NEK3P51956 Y_RNA.695-201ENST00000516715 107 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AP003730.1-201ENST00000524605 285 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.36□□□□□ -1.71
NEK3P51956 DEFB108D-201ENST00000527787 222 ntBASIC4.36□□□□□ -1.71
NEK3P51956 CYCSP29-201ENST00000533731 318 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.36□□□□□ -1.71
NEK3P51956 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.36□□□□□ -1.71
NEK3P51956 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
NEK3P51956 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.36□□□□□ -1.71
NEK3P51956 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.36□□□□□ -1.71
NEK3P51956 AL034351.1-201ENST00000605288 668 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AC080013.6-201ENST00000606185 215 ntBASIC4.36□□□□□ -1.71
NEK3P51956 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.36□□□□□ -1.71
NEK3P51956 AC026368.1-201ENST00000614934 690 ntBASIC4.36□□□□□ -1.71
NEK3P51956 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AC104010.1-201ENST00000616889 150 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AC012150.2-201ENST00000621300 544 ntBASIC4.36□□□□□ -1.71
NEK3P51956 AC008785.1-201ENST00000624475 456 ntBASIC4.36□□□□□ -1.71
NEK3P51956 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 GABPAP-201ENST00000419271 1356 ntBASIC4.36□□□□□ -1.71
NEK3P51956 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 AC138915.3-201ENST00000562908 1389 ntBASIC4.36□□□□□ -1.71
NEK3P51956 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NEK3P51956 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NEK3P51956 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEK3P51956 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
NEK3P51956 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
NEK3P51956 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.35□□□□□ -1.71
NEK3P51956 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEK3P51956 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.35□□□□□ -1.71
NEK3P51956 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEK3P51956 SDAD1P2-201ENST00000441308 2028 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NEK3P51956 U3.4-201ENST00000363352 213 ntBASIC4.35□□□□□ -1.71
NEK3P51956 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NEK3P51956 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEK3P51956 RNU6-76P-201ENST00000384060 104 ntBASIC4.35□□□□□ -1.71
NEK3P51956 RPS26P8-201ENST00000393490 348 ntBASIC4.35□□□□□ -1.71
NEK3P51956 RNA5SP129-201ENST00000410276 118 ntBASIC4.35□□□□□ -1.71
NEK3P51956 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.35□□□□□ -1.71
NEK3P51956 RPL21P32-201ENST00000419877 477 ntBASIC4.35□□□□□ -1.71
NEK3P51956 PPP1R11P2-201ENST00000423543 382 ntBASIC4.35□□□□□ -1.71
NEK3P51956 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC004975.1-201ENST00000428733 208 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC024082.2-201ENST00000434771 238 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.35□□□□□ -1.71
NEK3P51956 AL512326.1-201ENST00000443050 721 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.35□□□□□ -1.71
NEK3P51956 AL592447.1-201ENST00000447592 540 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.35□□□□□ -1.71
NEK3P51956 AC008958.1-201ENST00000511047 682 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AF131216.2-201ENST00000512316 564 ntBASIC4.35□□□□□ -1.71
NEK3P51956 MTND5P13-201ENST00000513046 1079 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC117532.1-201ENST00000514638 323 ntBASIC4.35□□□□□ -1.71
NEK3P51956 RNA5SP73-201ENST00000516744 108 ntBASIC4.35□□□□□ -1.71
NEK3P51956 RNU6-798P-201ENST00000516912 103 ntBASIC4.35□□□□□ -1.71
NEK3P51956 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.35□□□□□ -1.71
NEK3P51956 OR4T1P-201ENST00000554933 911 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.35□□□□□ -1.71
NEK3P51956 TVP23BP1-201ENST00000557500 617 ntBASIC4.35□□□□□ -1.71
NEK3P51956 MED28P6-201ENST00000558776 231 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.35□□□□□ -1.71
NEK3P51956 MIR3921-201ENST00000577308 85 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AP001330.4-201ENST00000604350 154 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC112191.3-201ENST00000604371 277 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC012603.1-201ENST00000606424 528 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.35□□□□□ -1.71
NEK3P51956 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEK3P51956 AC092140.2-201ENST00000618027 521 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC009159.1-201ENST00000618386 642 ntBASIC4.35□□□□□ -1.71
NEK3P51956 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEK3P51956 AC048344.4-201ENST00000619744 527 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AC019226.1-201ENST00000625666 515 ntBASIC4.35□□□□□ -1.71
NEK3P51956 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.35□□□□□ -1.71
NEK3P51956 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.35□□□□□ -1.71
NEK3P51956 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NEK3P51956 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.35□□□□□ -1.71
NEK3P51956 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms