Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC018638.8-201ENST00000588755 281 ntBASIC4.84□□□□□ -1.63
PTPN1P18031 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN1P18031 AC115621.1-201ENST00000604653 858 ntBASIC4.84□□□□□ -1.63
PTPN1P18031 OR6R2P-201ENST00000609216 300 ntBASIC4.84□□□□□ -1.63
PTPN1P18031 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN1P18031 AP005019.3-201ENST00000620418 560 ntBASIC4.84□□□□□ -1.63
PTPN1P18031 AL159972.1-201ENST00000625150 448 ntBASIC4.84□□□□□ -1.63
PTPN1P18031 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN1P18031 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN1P18031 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN1P18031 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN1P18031 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN1P18031 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN1P18031 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.84□□□□□ -1.64
PTPN1P18031 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
PTPN1P18031 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN1P18031 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 AC091046.3-201ENST00000631455 1574 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTPN1P18031 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 MIR1-2-201ENST00000384961 85 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTPN1P18031 RNU2-15P-201ENST00000410692 191 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 RNU6-1068P-201ENST00000410958 103 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 RPS15AP40-201ENST00000419621 391 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 RPL7AP25-201ENST00000423357 805 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 RPS12P10-201ENST00000427031 377 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 OR4F13P-201ENST00000428478 931 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN1P18031 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN1P18031 RPS26P2-201ENST00000440331 348 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN1P18031 AL445433.1-201ENST00000457507 257 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 RPS4XP10-201ENST00000465034 731 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN1P18031 AC021146.1-201ENST00000511202 716 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 RNA5SP401-201ENST00000515920 127 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 RNU6-410P-201ENST00000517006 107 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.83□□□□□ -1.64
PTPN1P18031 RAB9BP1-201ENST00000519581 626 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN1P18031 AP000827.1-201ENST00000527814 258 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 AC007424.1-203ENST00000554613 687 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN1P18031 ANP32BP3-201ENST00000559213 706 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.83□□□□□ -1.64
PTPN1P18031 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN1P18031 MIR5096-201ENST00000583713 70 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN1P18031 KC877982.1-201ENST00000602313 470 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN1P18031 uc_338.12-201ENST00000616344 181 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 MIR6810-201ENST00000622701 70 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTPN1P18031 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PTPN1P18031 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN1P18031 AL672167.1-203ENST00000641299 2975 ntBASIC4.83□□□□□ -1.64
PTPN1P18031 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTPN1P18031 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PTPN1P18031 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN1P18031 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN1P18031 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN1P18031 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC139713.2-214ENST00000642059 1811 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 RNU6-845P-201ENST00000362578 103 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 RNU6-223P-201ENST00000362830 107 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 RN7SKP224-201ENST00000364140 325 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN1P18031 RNU6-116P-201ENST00000384042 109 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC016397.1-201ENST00000412463 242 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 RPL31P2-201ENST00000413849 377 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC008850.1-201ENST00000427546 362 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC093156.1-201ENST00000440382 670 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN1P18031 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN1P18031 RPS27AP17-201ENST00000463344 455 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 RPS20P21-201ENST00000466859 343 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
PTPN1P18031 PCBP2P3-201ENST00000509726 843 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 Y_RNA.675-201ENST00000516389 149 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 SCARNA24.1-201ENST00000516465 137 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN1P18031 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN1P18031 AC107918.3-201ENST00000533272 382 ntBASIC4.82□□□□□ -1.64
PTPN1P18031 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms