Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CD44P16070 U1.31-201ENST00000620022 160 ntBASIC7.22□□□□□ -1.25
CD44P16070 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.22□□□□□ -1.25
CD44P16070 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CD44P16070 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.22□□□□□ -1.25
CD44P16070 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.22□□□□□ -1.25
CD44P16070 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
CD44P16070 AP000756.2-201ENST00000624168 2567 ntBASIC7.21□□□□□ -1.25
CD44P16070 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC7.21□□□□□ -1.25
CD44P16070 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CD44P16070 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CD44P16070 AC099654.2-201ENST00000433031 1980 ntBASIC7.21□□□□□ -1.26
CD44P16070 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CD44P16070 PPIAP24-201ENST00000328558 471 ntBASIC7.21□□□□□ -1.26
CD44P16070 Y_RNA.328-201ENST00000365208 113 ntBASIC7.21□□□□□ -1.26
CD44P16070 SNORD58C-201ENST00000365223 64 ntBASIC7.21□□□□□ -1.26
CD44P16070 RNU6-1074P-201ENST00000383995 104 ntBASIC7.21□□□□□ -1.26
CD44P16070 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CD44P16070 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC7.21□□□□□ -1.26
CD44P16070 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC7.21□□□□□ -1.26
CD44P16070 AL845321.1-201ENST00000444603 348 ntBASIC7.21□□□□□ -1.26
CD44P16070 AC092470.1-201ENST00000546187 132 ntBASIC7.21□□□□□ -1.26
CD44P16070 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC7.21□□□□□ -1.26
CD44P16070 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.21□□□□□ -1.26
CD44P16070 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC7.21□□□□□ -1.26
CD44P16070 AC092628.2-201ENST00000622492 339 ntBASIC7.21□□□□□ -1.26
CD44P16070 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.26
CD44P16070 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CD44P16070 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.26
CD44P16070 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CD44P16070 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
CD44P16070 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CD44P16070 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CD44P16070 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CD44P16070 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.21□□□□□ -1.26
CD44P16070 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.2□□□□□ -1.26
CD44P16070 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
CD44P16070 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.2□□□□□ -1.26
CD44P16070 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CD44P16070 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.2□□□□□ -1.26
CD44P16070 RNA5SP429-201ENST00000363688 109 ntBASIC7.2□□□□□ -1.26
CD44P16070 RNA5SP442-201ENST00000365050 107 ntBASIC7.2□□□□□ -1.26
CD44P16070 Y_RNA.393-201ENST00000383936 102 ntBASIC7.2□□□□□ -1.26
CD44P16070 SNORA75.5-201ENST00000391291 81 ntBASIC7.2□□□□□ -1.26
CD44P16070 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC7.2□□□□□ -1.26
CD44P16070 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.2□□□□□ -1.26
CD44P16070 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.2□□□□□ -1.26
CD44P16070 AHCYP8-201ENST00000425108 209 ntBASIC7.2□□□□□ -1.26
CD44P16070 AC124916.1-201ENST00000444020 547 ntBASIC7.2□□□□□ -1.26
CD44P16070 AL121914.1-201ENST00000450188 156 ntBASIC7.2□□□□□ -1.26
CD44P16070 AP006222.1-205ENST00000450734 457 ntBASIC7.2□□□□□ -1.26
CD44P16070 AC005532.2-201ENST00000467154 373 ntBASIC7.2□□□□□ -1.26
CD44P16070 RPL23AP45-201ENST00000476406 468 ntBASIC7.2□□□□□ -1.26
CD44P16070 AC022493.1-201ENST00000492984 337 ntBASIC7.2□□□□□ -1.26
CD44P16070 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CD44P16070 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.2□□□□□ -1.26
CD44P16070 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
CD44P16070 FXYD6P1-201ENST00000604857 285 ntBASIC7.2□□□□□ -1.26
CD44P16070 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC7.2□□□□□ -1.26
CD44P16070 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.2□□□□□ -1.26
CD44P16070 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC7.2□□□□□ -1.26
CD44P16070 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CD44P16070 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC7.2□□□□□ -1.26
CD44P16070 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CD44P16070 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 PRNCR1-201ENST00000635449 12727 ntBASIC7.2□□□□□ -1.26
CD44P16070 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CD44P16070 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.2□□□□□ -1.26
CD44P16070 PABPC1P6-201ENST00000445594 1829 ntBASIC7.2□□□□□ -1.26
CD44P16070 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CD44P16070 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CD44P16070 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.2□□□□□ -1.26
CD44P16070 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CD44P16070 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.19□□□□□ -1.26
CD44P16070 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CD44P16070 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.19□□□□□ -1.26
CD44P16070 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.19□□□□□ -1.26
CD44P16070 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 AC074141.1-201ENST00000588129 2995 ntBASIC7.19□□□□□ -1.26
CD44P16070 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms