Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 USP9YP20-201ENST00000419224 558 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AL590762.4-201ENST00000425885 253 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC011816.1-201ENST00000441346 546 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC092798.1-201ENST00000458542 409 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC107626.1-201ENST00000471084 183 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL23AP49-201ENST00000492925 468 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 GZMAP1-201ENST00000503054 631 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC021146.7-201ENST00000509604 775 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC008494.2-201ENST00000514544 370 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 MTCO1P35-201ENST00000515270 228 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 RN7SKP57-201ENST00000517248 293 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC009812.2-201ENST00000517657 457 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AP003467.2-201ENST00000520175 319 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC008562.1-201ENST00000521763 330 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 ATP5F1P5-201ENST00000526403 760 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR3122-201ENST00000577243 73 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC011471.1-201ENST00000585766 187 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC093227.2-201ENST00000589357 285 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 BNIP3P11-201ENST00000603878 563 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC012493.3-201ENST00000604494 112 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR3651-201ENST00000630427 90 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC244258.1-201ENST00000637553 1071 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 MFSD8-245ENST00000641743 948 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC096644.4-201ENST00000563417 2912 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL365361.1-201ENST00000566942 3481 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 PRRC2CP1-201ENST00000404428 159 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 MTATP6P31-201ENST00000406985 692 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 RPS15AP38-201ENST00000413110 372 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 SEPT2P1-201ENST00000419651 180 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL358075.3-201ENST00000426289 226 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 CYCSP42-201ENST00000450823 238 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 TRGVB-201ENST00000453257 471 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC008280.2-201ENST00000455473 307 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC087588.1-201ENST00000462203 316 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 XKRY-201ENST00000510392 1100 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC090888.1-201ENST00000561335 1141 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 MTCYBP28-201ENST00000566728 1132 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC105137.2-201ENST00000569073 466 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR3935-201ENST00000583472 104 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC012254.4-201ENST00000588843 273 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL109918.3-201ENST00000603072 338 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC073111.2-201ENST00000605657 1075 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC211433.2-201ENST00000608433 387 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL627230.6-201ENST00000611129 280 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 U4.3-201ENST00000621047 82 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AC011477.1-204ENST00000623416 1325 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL022578.1-201ENST00000439330 1433 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 AL354685.2-201ENST00000448218 1447 ntBASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CHKB-CPT1BH3BT56 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms