Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 Z94722.1-201ENST00000604328 474 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC080013.6-201ENST00000606185 215 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AP002826.1-201ENST00000608835 315 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 MIR6748-201ENST00000610433 71 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL356596.1-201ENST00000624230 379 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL159972.1-201ENST00000625150 448 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC099063.3-201ENST00000642066 185 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AP000526.1-201ENST00000603308 1388 ntBASIC3.09□□□□□ -1.92
SRRM4A7MD48 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SRRM4A7MD48 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SRRM4A7MD48 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SRRM4A7MD48 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 PRO1804-201ENST00000623780 2050 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AF127577.6-201ENST00000623352 2191 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC090740.1-201ENST00000623193 2262 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC118273.1-201ENST00000525324 3006 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 DEFB108F-201ENST00000344638 222 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 RNU6-1078P-201ENST00000364522 103 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 RNU6-343P-201ENST00000364709 104 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 MIR141-201ENST00000384975 95 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 U3.20-201ENST00000390909 217 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 RHEBP3-201ENST00000411920 351 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 HMGB1P11-201ENST00000413899 637 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 CYP4F29P-201ENST00000420685 446 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 RPL35AP22-201ENST00000436855 335 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 SNORA71B-202ENST00000439232 272 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC098824.1-201ENST00000453565 980 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC002456.2-201ENST00000509356 380 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 RAC1P2-201ENST00000511164 579 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC017037.2-201ENST00000513850 890 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 RN7SKP289-201ENST00000517244 295 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 IGKV2D-23-201ENST00000518179 286 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 SUMO2P20-201ENST00000520803 283 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AP001804.3-201ENST00000525146 880 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 DEFB108D-201ENST00000527787 222 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AP004247.1-201ENST00000531556 1289 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 BNIP3P5-201ENST00000562290 498 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 MIR3921-201ENST00000577308 85 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AP001004.1-201ENST00000582468 324 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC022916.3-201ENST00000592961 742 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AL590392.1-201ENST00000604960 446 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC018714.1-201ENST00000605028 208 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AL592436.1-201ENST00000605135 558 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC018638.7-201ENST00000605836 1114 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC083809.1-201ENST00000615051 472 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC079684.1-201ENST00000621405 437 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 MIR6500-201ENST00000622700 86 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC091905.1-201ENST00000624400 311 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC068137.4-201ENST00000638485 296 ntBASIC3.08□□□□□ -1.92
SRRM4A7MD48 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.08□□□□□ -1.92
SRRM4A7MD48 AP001486.2-201ENST00000561652 5113 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms