Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 Z95114.1-201ENST00000624264 14574 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC026523.2-201ENST00000625039 7739 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 EIF2AP4-201ENST00000424793 1781 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 RNU4-42P-201ENST00000364738 142 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 RNU1-59P-201ENST00000364829 162 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-306P-201ENST00000384617 107 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 RPL30P2-201ENST00000414021 291 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC114491.1-201ENST00000416095 246 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AL133396.1-201ENST00000432048 687 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 RPL21P112-201ENST00000434403 463 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 TPT1P13-201ENST00000449760 499 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 CHEK2P4-201ENST00000450340 246 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 RPL17P19-201ENST00000489069 552 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AL035690.1-201ENST00000490892 383 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 RN7SL284P-201ENST00000498823 275 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC105758.1-201ENST00000506038 399 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 SNORA31.6-201ENST00000516241 130 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC119403.2-201ENST00000590960 598 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 OR7E18P-201ENST00000592589 702 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AL049767.1-202ENST00000637826 242 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC015799.1-201ENST00000622996 3122 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 DNM1P47-203ENST00000571780 12667 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 AC008758.3-201ENST00000507003 1829 ntBASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CUEDC1Q9NWM3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 Y_RNA.200-201ENST00000364018 102 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-960P-201ENST00000364056 120 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 SNORA70E-201ENST00000384492 135 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AL138885.1-201ENST00000405921 675 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 BX510359.3-201ENST00000422168 306 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 FAR2P4-202ENST00000425399 584 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 EIF1P2-201ENST00000428233 350 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AC097713.2-201ENST00000430199 356 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AC127537.2-201ENST00000439258 465 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 RN7SL717P-201ENST00000478343 297 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AC114728.1-201ENST00000488289 483 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AL136038.1-201ENST00000497246 351 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AC016559.2-201ENST00000510759 359 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 RNA5SP340-201ENST00000517132 107 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-897P-201ENST00000517135 105 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 HMGN1P28-201ENST00000521340 364 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AP003396.4-201ENST00000527574 265 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AC090517.1-201ENST00000569307 266 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 AC009570.1-201ENST00000609599 745 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 SDR42E1P1-201ENST00000611327 477 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 LINC01963-201ENST00000562038 3148 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 SAGE4P-201ENST00000442271 3381 ntBASIC5.8□□□□□ -1.48
CUEDC1Q9NWM3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms