Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDT1Q9H211 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDT1Q9H211 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
CDT1Q9H211 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDT1Q9H211 AC011978.2-201ENST00000569835 2054 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.06□□□□□ -1.76
CDT1Q9H211 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDT1Q9H211 OR11H5P-202ENST00000641612 1325 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDT1Q9H211 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDT1Q9H211 MIR448-201ENST00000362131 111 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 RNA5SP51-201ENST00000364750 119 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.06□□□□□ -1.76
CDT1Q9H211 SNORA75-201ENST00000384158 137 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 RNU6-1119P-201ENST00000384349 108 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 RNU6-1215P-201ENST00000384441 102 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 Y_RNA.516-201ENST00000384541 124 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AL663109.1-201ENST00000411498 844 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AL160275.2-201ENST00000412010 394 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 CDK8P2-201ENST00000415020 547 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 SYF2P2-201ENST00000417620 583 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AL035423.1-201ENST00000420331 213 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AL451062.2-201ENST00000427515 271 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.06□□□□□ -1.76
CDT1Q9H211 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.06□□□□□ -1.76
CDT1Q9H211 MED14P1-201ENST00000430517 648 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.06□□□□□ -1.76
CDT1Q9H211 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.06□□□□□ -1.76
CDT1Q9H211 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.06□□□□□ -1.76
CDT1Q9H211 MTND1P1-201ENST00000445453 368 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 RPL36AP33-201ENST00000450395 310 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.06□□□□□ -1.76
CDT1Q9H211 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.06□□□□□ -1.76
CDT1Q9H211 RPL37P6-202ENST00000464216 403 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AC012170.1-201ENST00000495139 359 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.06□□□□□ -1.76
CDT1Q9H211 PAICSP4-201ENST00000517543 1253 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AC087276.1-201ENST00000529659 480 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 HSPE1P3-201ENST00000559254 309 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.06□□□□□ -1.76
CDT1Q9H211 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDT1Q9H211 MTATP6P3-201ENST00000581686 676 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AP001180.3-201ENST00000582221 145 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.06□□□□□ -1.76
CDT1Q9H211 YWHAQP7-201ENST00000603536 658 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 AC015871.2-201ENST00000603605 948 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.06□□□□□ -1.76
CDT1Q9H211 AC100793.4-201ENST00000613683 429 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 MIR7844-201ENST00000616161 122 ntBASIC4.06□□□□□ -1.76
CDT1Q9H211 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.06□□□□□ -1.76
CDT1Q9H211 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDT1Q9H211 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.06□□□□□ -1.76
CDT1Q9H211 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDT1Q9H211 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDT1Q9H211 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.05□□□□□ -1.76
CDT1Q9H211 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDT1Q9H211 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDT1Q9H211 RNU6-462P-201ENST00000362659 105 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 RNA5SP424-201ENST00000390988 115 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 DHFRP6-201ENST00000401776 268 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.05□□□□□ -1.76
CDT1Q9H211 ELOCP17-201ENST00000414751 326 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 FTH1P6-201ENST00000430768 320 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.05□□□□□ -1.76
CDT1Q9H211 ATP5HP2-201ENST00000433885 485 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 UBE2FP3-201ENST00000436366 524 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AL031667.1-201ENST00000440222 725 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC006480.1-201ENST00000449887 378 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.05□□□□□ -1.76
CDT1Q9H211 HMGB3P22-202ENST00000451823 572 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC093899.1-201ENST00000457984 376 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.05□□□□□ -1.76
CDT1Q9H211 RNU7-136P-201ENST00000458819 69 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC026410.2-201ENST00000460281 156 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDT1Q9H211 RPS26P15-201ENST00000488067 348 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.05□□□□□ -1.76
CDT1Q9H211 AC109927.2-201ENST00000506416 303 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.05□□□□□ -1.76
CDT1Q9H211 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 RN7SKP277-201ENST00000516895 283 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 MYL12AP1-201ENST00000518490 515 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 IGKV2-23-201ENST00000518729 323 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 SUMO2P20-201ENST00000520803 283 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.05□□□□□ -1.76
CDT1Q9H211 AP000873.5-201ENST00000533906 236 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC092470.1-201ENST00000546187 132 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.05□□□□□ -1.76
CDT1Q9H211 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.05□□□□□ -1.76
CDT1Q9H211 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.05□□□□□ -1.76
CDT1Q9H211 AC008507.1-201ENST00000587506 734 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AP003465.2-201ENST00000602571 373 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AL139395.1-201ENST00000603662 160 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AL136363.2-201ENST00000604173 851 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC092354.1-201ENST00000606057 376 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC107214.2-201ENST00000608204 634 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC013476.2-201ENST00000614456 459 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC015540.1-201ENST00000615828 501 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms