Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AC005951.2-201ENST00000576282 495 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 MIR4646-201ENST00000580775 63 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 LARP7P1-201ENST00000605576 316 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 uc_338.34-201ENST00000617467 174 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 uc_338.7-201ENST00000621834 124 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AL139276.1-201ENST00000311910 1001 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 RNU6-116P-201ENST00000384042 109 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 MIR550A3-201ENST00000390735 95 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 HSPA8P15-201ENST00000401676 786 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AL118520.1-201ENST00000450770 291 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC079168.1-201ENST00000458741 345 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 RPL31P13-201ENST00000484151 370 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC114781.4-201ENST00000513707 639 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 SUMO2P20-201ENST00000520803 283 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AP006245.2-201ENST00000522004 300 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AP005435.4-201ENST00000529514 284 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AL138976.2-201ENST00000563989 694 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC022968.1-201ENST00000567372 442 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC067852.3-201ENST00000589177 561 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC023421.1-201ENST00000590535 1785 ntBASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRAIPQ9BWF2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RNU6-288P-201ENST00000363690 104 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RNU6-767P-201ENST00000384132 107 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RNA5SP187-201ENST00000384400 119 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 MIR514A1-201ENST00000385133 98 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RNA5SP239-201ENST00000410218 129 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RNU2-71P-201ENST00000411395 189 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 CHEK2P3-201ENST00000416118 248 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AL451054.2-201ENST00000420896 202 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RPL12P3-201ENST00000440080 396 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC073465.2-201ENST00000440938 498 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 SNRPEP8-201ENST00000442866 260 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC093019.1-201ENST00000443135 252 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 RPL7P12-201ENST00000446719 750 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC058823.1-201ENST00000485315 474 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC022690.1-201ENST00000526681 550 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC114947.2-201ENST00000565748 2125 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC024940.4-201ENST00000605507 246 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC007619.2-201ENST00000605743 379 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 OR4G2P-202ENST00000641004 1759 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 AL031595.2-201ENST00000624215 19071 ntBASIC5.79□□□□□ -1.48
TRAIPQ9BWF2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRAIPQ9BWF2 AC103710.2-202ENST00000641454 2853 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms