Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6.46□□□□□ -1.38
LRCH3Q96II8 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
LRCH3Q96II8 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LRCH3Q96II8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC007785.2-201ENST00000598627 1916 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LRCH3Q96II8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LRCH3Q96II8 RNU6-1298P-201ENST00000362456 101 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 Y_RNA.43-201ENST00000362670 111 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 RNA5SP234-201ENST00000363916 119 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 RNU6-290P-201ENST00000365212 101 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 Y_RNA.586-201ENST00000391146 98 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC092809.3-201ENST00000415453 231 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC073063.1-201ENST00000434352 607 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 AL445433.1-201ENST00000457507 257 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 RN7SL583P-201ENST00000475692 287 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 RPL31P60-201ENST00000478450 367 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC104057.1-201ENST00000515547 497 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 AL442163.3-201ENST00000554110 156 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 MIR4301-201ENST00000577203 66 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC068790.4-201ENST00000602474 263 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC243654.2-201ENST00000612843 443 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 SNHG22-203ENST00000617833 660 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 PARP4P2-201ENST00000446672 3326 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LRCH3Q96II8 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LRCH3Q96II8 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC105749.1-201ENST00000631338 2008 ntBASIC6.45□□□□□ -1.38
LRCH3Q96II8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.45□□□□□ -1.38
LRCH3Q96II8 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 RNU6-1130P-201ENST00000365434 107 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 SNORD116-18-201ENST00000383961 92 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC069218.2-201ENST00000411665 344 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 NME1P1-201ENST00000420914 382 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 TMEM167AP1-201ENST00000423409 219 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 BX679664.1-201ENST00000434429 253 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 CYCSP12-201ENST00000437729 300 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC008267.6-201ENST00000441664 139 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 GAPDHP27-201ENST00000447427 1020 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC092967.1-201ENST00000449016 481 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC114982.1-201ENST00000469402 321 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 RNU6-1219P-201ENST00000516143 112 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 MRPS21P9-201ENST00000571150 257 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 RN7SL52P-201ENST00000584271 284 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AL162424.1-201ENST00000602325 221 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 RN7SL722P-201ENST00000617780 284 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 RN7SL565P-201ENST00000618246 284 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 MTND1P7-201ENST00000632801 297 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 SRRM1P3-201ENST00000426911 2678 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms