Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 AC079316.1-201ENST00000548397 411 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 NUDT7-205ENST00000564085 899 ntTSL 2 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 PRELID1P1-202ENST00000567272 903 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 RN7SL45P-201ENST00000578050 298 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 AC087783.2-201ENST00000605070 562 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 NDUFB1-206ENST00000605997 336 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 AL139124.1-201ENST00000609123 421 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 AC069200.1-201ENST00000609511 323 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 uc_338.27-201ENST00000611385 169 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 Metazoa_SRP.110-201ENST00000611670 282 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 AC089987.1-202ENST00000641959 426 ntBASIC3.21□□□□□ -1.9
SVIPQ8NHG7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.21□□□□□ -1.9
SVIPQ8NHG7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RNU6-428P-201ENST00000362942 107 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 SNORA71E-201ENST00000365032 132 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RNA5SP355-201ENST00000365317 135 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 LINC00951-201ENST00000373171 554 ntTSL 2 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 SNORA7.3-201ENST00000384186 139 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 MIR544A-201ENST00000384855 91 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RNA5SP256-201ENST00000390978 113 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RNU1-56P-201ENST00000391303 164 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL445529.1-201ENST00000398713 389 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 CES5AP1-201ENST00000400418 859 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RNU2-23P-201ENST00000410545 195 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RNU2-63P-201ENST00000410792 194 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RNA5SP306-201ENST00000411087 107 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RPSAP61-201ENST00000412542 878 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL117339.3-201ENST00000418733 162 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 NUP35P1-201ENST00000422734 947 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC093107.1-201ENST00000422772 609 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AK3P3-201ENST00000431883 664 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC104389.3-201ENST00000445629 235 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 PHBP16-201ENST00000446318 950 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RPL39P29-201ENST00000447779 157 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC073901.1-201ENST00000462471 408 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RN7SL174P-201ENST00000475578 289 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 RN7SL144P-201ENST00000475761 295 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 TAGLN3-206ENST00000486460 920 ntTSL 5 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC098799.2-201ENST00000509466 868 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC093840.1-201ENST00000511599 336 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC107918.1-201ENST00000528715 967 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC103996.1-201ENST00000555468 102 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 BNIP3P25-201ENST00000596023 559 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL670379.2-201ENST00000604983 252 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 MIR5739-201ENST00000619803 80 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL356321.1-201ENST00000621360 228 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC100810.6-201ENST00000638068 285 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AC008543.2-201ENST00000436907 1383 ntBASIC3.2□□□□□ -1.9
SVIPQ8NHG7 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SVIPQ8NHG7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms