Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHIC1Q5VXU3 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CHIC1Q5VXU3 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHIC1Q5VXU3 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHIC1Q5VXU3 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CHIC1Q5VXU3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 MIR544A-201ENST00000384855 91 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 Y_RNA.587-201ENST00000391210 103 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 RNA5SP136-201ENST00000410906 107 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 MTATP6P21-201ENST00000440681 189 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 AL389915.2-201ENST00000454576 441 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 AC107952.1-201ENST00000524200 376 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 AC103855.4-201ENST00000533158 265 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 AL160236.1-201ENST00000556317 195 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 MIR3135A-201ENST00000578460 77 ntBASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
CHIC1Q5VXU3 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHIC1Q5VXU3 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHIC1Q5VXU3 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHIC1Q5VXU3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CHIC1Q5VXU3 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHIC1Q5VXU3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHIC1Q5VXU3 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHIC1Q5VXU3 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 RPL10P16-201ENST00000325000 645 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 Y_RNA.243-201ENST00000364481 109 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 MIR549A-201ENST00000385268 96 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 TDGF1P1-201ENST00000445734 527 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AC090515.1-201ENST00000465295 476 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AP001803.1-201ENST00000525668 147 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 MED28P6-201ENST00000558776 231 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 MIR5009-201ENST00000578736 100 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AC015914.2-201ENST00000618167 288 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 MIR8089-201ENST00000620165 82 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AC087894.3-201ENST00000623682 349 ntBASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHIC1Q5VXU3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 MIR152-201ENST00000385212 87 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 SNORA48.5-201ENST00000391143 135 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 RNU2-55P-201ENST00000411146 174 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 GRPEL2P2-201ENST00000421856 670 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 IGHV5-78-201ENST00000450948 295 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 AC021074.2-201ENST00000468434 172 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 RPL31P41-201ENST00000477967 372 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 AC063943.2-201ENST00000495697 534 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 AC114781.3-201ENST00000512083 142 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 AC024614.1-201ENST00000577546 307 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 AC090132.2-201ENST00000615881 347 ntBASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHIC1Q5VXU3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 MITF-203ENST00000328528 4680 ntTSL 5 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHIC1Q5VXU3 AC232271.1-201ENST00000602455 2715 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHIC1Q5VXU3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 RNU6-799P-201ENST00000363567 107 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 RNA5SP302-201ENST00000364896 100 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 MIR1204-201ENST00000408388 67 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 SNORA36B-201ENST00000410438 131 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 Z85995.1-201ENST00000415547 335 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 FTH1P10-202ENST00000430907 550 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CHIC1Q5VXU3 FXNP1-201ENST00000555153 337 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 FXYD6P1-201ENST00000604857 285 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 U73479.1-201ENST00000618062 168 ntBASIC12□□□□□ -0.49
CHIC1Q5VXU3 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHIC1Q5VXU3 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHIC1Q5VXU3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHIC1Q5VXU3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms