Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC6A4P31645 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC6A4P31645 AC008958.1-201ENST00000511047 682 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AC008549.1-201ENST00000512900 643 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 SNORD116-26-201ENST00000516006 96 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 RNA5SP49-201ENST00000516450 115 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AC024224.1-201ENST00000538284 609 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AL109766.1-201ENST00000555080 552 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AL121579.1-201ENST00000555129 305 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AC068446.3-201ENST00000555285 382 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.46□□□□□ -1.7
SLC6A4P31645 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC6A4P31645 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.46□□□□□ -1.7
SLC6A4P31645 AC107954.1-201ENST00000565906 727 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC6A4P31645 AL355812.1-201ENST00000603215 216 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 MIR98-201ENST00000606724 119 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AC017083.3-201ENST00000609955 700 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AL133173.2-201ENST00000614270 90 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC6A4P31645 AP006248.2-201ENST00000623309 592 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 MIR3653-201ENST00000625572 110 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC6A4P31645 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC6A4P31645 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.46□□□□□ -1.7
SLC6A4P31645 LRRC77P-213ENST00000637727 880 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
SLC6A4P31645 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC6A4P31645 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC6A4P31645 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 MAPK10-349ENST00000641767 3661 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC6A4P31645 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SLC6A4P31645 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SLC6A4P31645 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC6A4P31645 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.7
SLC6A4P31645 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC6A4P31645 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC6A4P31645 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC6A4P31645 MTND5P33-201ENST00000571250 1450 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SLC6A4P31645 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SLC6A4P31645 RNA5SP175-201ENST00000364275 119 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 RNVU1-3-201ENST00000364313 161 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 U3.20-201ENST00000390909 217 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC6A4P31645 RNA5SP36-201ENST00000410197 133 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 RN7SKP235-201ENST00000410662 305 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 MIR1911-201ENST00000410783 80 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC6A4P31645 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC6A4P31645 MTCO2P11-201ENST00000431069 680 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 EZH2P1-201ENST00000431167 291 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AL049734.2-201ENST00000441066 616 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 UQCRHP4-201ENST00000471686 272 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AC108022.1-201ENST00000493466 478 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC6A4P31645 AC105914.1-201ENST00000511798 226 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC6A4P31645 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC6A4P31645 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC6A4P31645 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC6A4P31645 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC6A4P31645 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.45□□□□□ -1.7
SLC6A4P31645 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC6A4P31645 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.45□□□□□ -1.7
SLC6A4P31645 BNIP3P22-201ENST00000593399 556 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 IPO5P1-202ENST00000600039 287 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AP000907.4-201ENST00000604143 237 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AC025588.3-201ENST00000604182 274 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AC009268.2-201ENST00000621925 457 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AC140113.4-201ENST00000622087 222 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AL732618.1-201ENST00000623251 301 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 AC091905.1-201ENST00000624400 311 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC6A4P31645 MIR1321-201ENST00000637766 79 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC6A4P31645 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SLC6A4P31645 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC6A4P31645 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC6A4P31645 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC6A4P31645 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SLC6A4P31645 ZNF734P-201ENST00000419494 1534 ntBASIC4.45□□□□□ -1.7
SLC6A4P31645 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC6A4P31645 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC6A4P31645 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SLC6A4P31645 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC6A4P31645 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
SLC6A4P31645 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SLC6A4P31645 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC6A4P31645 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC6A4P31645 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC6A4P31645 RNU6-181P-201ENST00000363225 107 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 MIR195-201ENST00000385194 87 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 RNU2-15P-201ENST00000410692 191 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC6A4P31645 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC6A4P31645 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms