Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNRPEP8-201ENST00000442866 260 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 AC016696.1-201ENST00000446949 318 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 OR1H1P-201ENST00000448731 937 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 RPS11P1-201ENST00000451072 473 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 RPS29P15-201ENST00000458329 171 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 FTH1P2-201ENST00000466086 412 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 AC116562.3-201ENST00000506136 177 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 AC046134.1-201ENST00000514454 666 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 SNORA40.12-201ENST00000516329 111 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC3P19447 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.73□□□□□ -1.49
ERCC3P19447 AC068587.5-201ENST00000528506 175 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 PHBP17-201ENST00000528576 541 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 DEFB109D-201ENST00000529497 240 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 OR5AL2P-201ENST00000532185 920 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 AP001880.2-201ENST00000538233 448 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.73□□□□□ -1.49
ERCC3P19447 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.73□□□□□ -1.49
ERCC3P19447 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 DISC2.1-201ENST00000612827 205 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 U6.114-201ENST00000636407 96 ntBASIC5.73□□□□□ -1.49
ERCC3P19447 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.73□□□□□ -1.49
ERCC3P19447 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC3P19447 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC3P19447 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC3P19447 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ERCC3P19447 AC073343.1-201ENST00000328239 651 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 Y_RNA.22-201ENST00000362492 102 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 RNU6-188P-201ENST00000364207 107 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 UBBP2-201ENST00000376781 231 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 RNU6-1074P-201ENST00000383995 104 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 SNRPEP10-201ENST00000420249 274 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 MTCYBP8-201ENST00000422855 651 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 RWDD4P2-201ENST00000426392 563 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 AC068287.1-201ENST00000430283 295 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 MTATP6P16-201ENST00000434543 526 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC3P19447 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 RPS29P9-201ENST00000440360 171 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 CALM1P1-201ENST00000442082 433 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.72□□□□□ -1.49
ERCC3P19447 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ERCC3P19447 AL049874.2-201ENST00000492636 288 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.72□□□□□ -1.49
ERCC3P19447 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC3P19447 AC108475.1-201ENST00000507880 950 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 RNU6-840P-201ENST00000517275 65 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC3P19447 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC3P19447 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.72□□□□□ -1.49
ERCC3P19447 AC012339.2-201ENST00000523996 453 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 AP001646.1-201ENST00000527936 915 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.72□□□□□ -1.49
ERCC3P19447 AC022884.2-201ENST00000578535 580 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 MTCYBP13-201ENST00000578634 1093 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 BNIP3P10-201ENST00000605360 577 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 AP005264.7-201ENST00000625003 745 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 AL731532.2-201ENST00000623542 1953 ntBASIC5.72□□□□□ -1.49
ERCC3P19447 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
ERCC3P19447 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC3P19447 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
ERCC3P19447 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC3P19447 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ERCC3P19447 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
ERCC3P19447 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ERCC3P19447 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.71□□□□□ -1.5
ERCC3P19447 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC3P19447 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC3P19447 Y_RNA.86-201ENST00000363020 111 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 SNORA70.10-201ENST00000384515 134 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.71□□□□□ -1.5
ERCC3P19447 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC3P19447 AC093106.2-201ENST00000428212 385 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC3P19447 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC3P19447 AC098614.3-201ENST00000438957 440 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 AL162389.1-201ENST00000449233 177 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.71□□□□□ -1.5
ERCC3P19447 AURKAPS2-201ENST00000454983 333 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 AC245028.2-201ENST00000458673 253 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 SNORD97-201ENST00000459187 142 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.71□□□□□ -1.5
ERCC3P19447 AC126389.1-201ENST00000477436 290 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 VN1R105P-201ENST00000486595 910 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.71□□□□□ -1.5
ERCC3P19447 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC3P19447 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC3P19447 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms