Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC002550.2-201ENST00000621246 394 ntBASIC3.7□□□□□ -1.82
APOA4P06727 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.7□□□□□ -1.82
APOA4P06727 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.7□□□□□ -1.82
APOA4P06727 AP000776.1-201ENST00000530032 1663 ntBASIC3.7□□□□□ -1.82
APOA4P06727 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
APOA4P06727 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOA4P06727 CUL1P1-201ENST00000509510 2425 ntBASIC3.7□□□□□ -1.82
APOA4P06727 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
APOA4P06727 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOA4P06727 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOA4P06727 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.69□□□□□ -1.82
APOA4P06727 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOA4P06727 RNA5SP479-201ENST00000364858 117 ntBASIC3.69□□□□□ -1.82
APOA4P06727 RPS3AP24-201ENST00000407896 734 ntBASIC3.69□□□□□ -1.82
APOA4P06727 USP9YP33-201ENST00000412220 421 ntBASIC3.69□□□□□ -1.82
APOA4P06727 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.69□□□□□ -1.82
APOA4P06727 AL139247.1-201ENST00000422768 325 ntBASIC3.69□□□□□ -1.82
APOA4P06727 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOA4P06727 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.69□□□□□ -1.82
APOA4P06727 USP9YP35-201ENST00000435696 412 ntBASIC3.69□□□□□ -1.82
APOA4P06727 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.69□□□□□ -1.82
APOA4P06727 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.69□□□□□ -1.82
APOA4P06727 HMGN2P13-201ENST00000476476 274 ntBASIC3.69□□□□□ -1.82
APOA4P06727 GTF2IP9-201ENST00000502460 301 ntBASIC3.69□□□□□ -1.82
APOA4P06727 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 SCARNA14-201ENST00000516903 136 ntBASIC3.69□□□□□ -1.82
APOA4P06727 RNU6-714P-201ENST00000516963 103 ntBASIC3.69□□□□□ -1.82
APOA4P06727 AP000926.4-201ENST00000527351 454 ntBASIC3.69□□□□□ -1.82
APOA4P06727 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOA4P06727 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.69□□□□□ -1.82
APOA4P06727 AC087499.8-201ENST00000578406 226 ntBASIC3.69□□□□□ -1.82
APOA4P06727 AC011451.2-201ENST00000604303 598 ntBASIC3.69□□□□□ -1.82
APOA4P06727 AC097478.2-201ENST00000610572 514 ntBASIC3.69□□□□□ -1.82
APOA4P06727 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
APOA4P06727 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 AL732372.2-225ENST00000642124 456 ntBASIC3.69□□□□□ -1.82
APOA4P06727 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOA4P06727 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.69□□□□□ -1.82
APOA4P06727 AC011477.1-204ENST00000623416 1325 ntBASIC3.69□□□□□ -1.82
APOA4P06727 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.68□□□□□ -1.82
APOA4P06727 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
APOA4P06727 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 AL161781.1-201ENST00000354277 403 ntBASIC3.68□□□□□ -1.82
APOA4P06727 RNU6-359P-201ENST00000365466 108 ntBASIC3.68□□□□□ -1.82
APOA4P06727 Y_RNA.548-201ENST00000384656 105 ntBASIC3.68□□□□□ -1.82
APOA4P06727 RNU6-1077P-201ENST00000410506 102 ntBASIC3.68□□□□□ -1.82
APOA4P06727 THAP5P1-201ENST00000439089 262 ntBASIC3.68□□□□□ -1.82
APOA4P06727 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.68□□□□□ -1.82
APOA4P06727 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.68□□□□□ -1.82
APOA4P06727 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.68□□□□□ -1.82
APOA4P06727 AC234775.1-201ENST00000454247 670 ntBASIC3.68□□□□□ -1.82
APOA4P06727 AC104308.1-201ENST00000454621 333 ntBASIC3.68□□□□□ -1.82
APOA4P06727 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.68□□□□□ -1.82
APOA4P06727 USP9YP25-201ENST00000457708 443 ntBASIC3.68□□□□□ -1.82
APOA4P06727 RPL7P18-201ENST00000478965 734 ntBASIC3.68□□□□□ -1.82
APOA4P06727 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.68□□□□□ -1.82
APOA4P06727 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.68□□□□□ -1.82
APOA4P06727 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.68□□□□□ -1.82
APOA4P06727 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.68□□□□□ -1.82
APOA4P06727 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.68□□□□□ -1.82
APOA4P06727 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.68□□□□□ -1.82
APOA4P06727 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.68□□□□□ -1.82
APOA4P06727 AC105224.1-201ENST00000587055 421 ntBASIC3.68□□□□□ -1.82
APOA4P06727 BNIP3P40-201ENST00000596017 556 ntBASIC3.68□□□□□ -1.82
APOA4P06727 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.68□□□□□ -1.82
APOA4P06727 AL450472.3-201ENST00000615578 367 ntBASIC3.68□□□□□ -1.82
APOA4P06727 MIR6130-201ENST00000619419 109 ntBASIC3.68□□□□□ -1.82
APOA4P06727 AC079684.1-201ENST00000621405 437 ntBASIC3.68□□□□□ -1.82
APOA4P06727 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
APOA4P06727 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.68□□□□□ -1.82
APOA4P06727 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
APOA4P06727 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOA4P06727 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.67□□□□□ -1.82
APOA4P06727 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
APOA4P06727 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.67□□□□□ -1.82
APOA4P06727 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA4P06727 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOA4P06727 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA4P06727 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.67□□□□□ -1.82
APOA4P06727 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
APOA4P06727 RN7SKP280-201ENST00000364196 304 ntBASIC3.67□□□□□ -1.82
APOA4P06727 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
APOA4P06727 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.67□□□□□ -1.82
APOA4P06727 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA4P06727 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
APOA4P06727 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
APOA4P06727 USP9YP36-201ENST00000424581 829 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms