Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HMGN2P31-201ENST00000432430 273 ntBASIC3.81□□□□□ -1.8
BEST1O76090 AF228730.2-201ENST00000438784 848 ntBASIC3.81□□□□□ -1.8
BEST1O76090 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST1O76090 VN1R34P-201ENST00000447387 883 ntBASIC3.81□□□□□ -1.8
BEST1O76090 ANP32BP2-201ENST00000454525 545 ntBASIC3.81□□□□□ -1.8
BEST1O76090 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST1O76090 RPL7P15-201ENST00000461190 712 ntBASIC3.81□□□□□ -1.8
BEST1O76090 AC007537.2-201ENST00000472093 511 ntBASIC3.81□□□□□ -1.8
BEST1O76090 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST1O76090 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST1O76090 AC106872.2-201ENST00000494303 480 ntBASIC3.81□□□□□ -1.8
BEST1O76090 AC068305.1-201ENST00000497406 726 ntBASIC3.81□□□□□ -1.8
BEST1O76090 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST1O76090 AC105914.1-201ENST00000511798 226 ntBASIC3.81□□□□□ -1.8
BEST1O76090 RNU1-61P-201ENST00000516107 151 ntBASIC3.81□□□□□ -1.8
BEST1O76090 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST1O76090 MRPS36P3-201ENST00000519284 130 ntBASIC3.81□□□□□ -1.8
BEST1O76090 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.81□□□□□ -1.8
BEST1O76090 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.81□□□□□ -1.8
BEST1O76090 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
BEST1O76090 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST1O76090 AC020914.6-201ENST00000594327 272 ntBASIC3.81□□□□□ -1.8
BEST1O76090 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.81□□□□□ -1.8
BEST1O76090 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST1O76090 VN1R92P-201ENST00000598511 928 ntBASIC3.81□□□□□ -1.8
BEST1O76090 AC010591.1-201ENST00000603941 649 ntBASIC3.81□□□□□ -1.8
BEST1O76090 MIR92B-201ENST00000607575 96 ntBASIC3.81□□□□□ -1.8
BEST1O76090 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST1O76090 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST1O76090 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.81□□□□□ -1.8
BEST1O76090 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.81□□□□□ -1.8
BEST1O76090 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
BEST1O76090 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST1O76090 PRO1804-201ENST00000623780 2050 ntBASIC3.81□□□□□ -1.8
BEST1O76090 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST1O76090 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST1O76090 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
BEST1O76090 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST1O76090 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
BEST1O76090 AL161912.2-201ENST00000565707 3007 ntBASIC3.81□□□□□ -1.8
BEST1O76090 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BEST1O76090 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 Y_RNA.234-201ENST00000364409 97 ntBASIC3.8□□□□□ -1.8
BEST1O76090 RNU6-343P-201ENST00000364709 104 ntBASIC3.8□□□□□ -1.8
BEST1O76090 RNU6-359P-201ENST00000365466 108 ntBASIC3.8□□□□□ -1.8
BEST1O76090 RNU6-882P-201ENST00000391025 103 ntBASIC3.8□□□□□ -1.8
BEST1O76090 AL136372.1-201ENST00000403060 228 ntBASIC3.8□□□□□ -1.8
BEST1O76090 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
BEST1O76090 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.8□□□□□ -1.8
BEST1O76090 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.8□□□□□ -1.8
BEST1O76090 AL035407.1-201ENST00000429211 571 ntBASIC3.8□□□□□ -1.8
BEST1O76090 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.8□□□□□ -1.8
BEST1O76090 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 EEF1E1P1-201ENST00000446998 430 ntBASIC3.8□□□□□ -1.8
BEST1O76090 AC010655.1-201ENST00000449336 292 ntBASIC3.8□□□□□ -1.8
BEST1O76090 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.8□□□□□ -1.8
BEST1O76090 AC099563.1-201ENST00000456086 418 ntBASIC3.8□□□□□ -1.8
BEST1O76090 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.8□□□□□ -1.8
BEST1O76090 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.8□□□□□ -1.8
BEST1O76090 SNORA70.14-201ENST00000516205 110 ntBASIC3.8□□□□□ -1.8
BEST1O76090 UBTFL10-201ENST00000528532 562 ntBASIC3.8□□□□□ -1.8
BEST1O76090 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.8□□□□□ -1.8
BEST1O76090 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.8□□□□□ -1.8
BEST1O76090 AL360157.1-201ENST00000565962 87 ntBASIC3.8□□□□□ -1.8
BEST1O76090 AL031281.1-201ENST00000604049 488 ntBASIC3.8□□□□□ -1.8
BEST1O76090 AC011451.2-201ENST00000604303 598 ntBASIC3.8□□□□□ -1.8
BEST1O76090 AP001330.4-201ENST00000604350 154 ntBASIC3.8□□□□□ -1.8
BEST1O76090 AL022099.1-201ENST00000604551 712 ntBASIC3.8□□□□□ -1.8
BEST1O76090 AC090186.1-201ENST00000605991 572 ntBASIC3.8□□□□□ -1.8
BEST1O76090 MIR486-1-201ENST00000612171 68 ntBASIC3.8□□□□□ -1.8
BEST1O76090 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 AL732618.1-201ENST00000623251 301 ntBASIC3.8□□□□□ -1.8
BEST1O76090 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST1O76090 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
BEST1O76090 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BEST1O76090 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST1O76090 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
BEST1O76090 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
BEST1O76090 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.79□□□□□ -1.8
BEST1O76090 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
BEST1O76090 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
BEST1O76090 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST1O76090 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BEST1O76090 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.79□□□□□ -1.8
BEST1O76090 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
BEST1O76090 AC002546.1-201ENST00000588041 2504 ntBASIC3.79□□□□□ -1.8
BEST1O76090 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BEST1O76090 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.79□□□□□ -1.8
BEST1O76090 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST1O76090 FRG1BP-201ENST00000278882 761 ntBASIC3.79□□□□□ -1.8
BEST1O76090 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
BEST1O76090 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BEST1O76090 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BEST1O76090 MIR135A2-201ENST00000384854 100 ntBASIC3.79□□□□□ -1.8
BEST1O76090 MIR449B-201ENST00000384995 97 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms