Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 CYCSP27-201ENST00000527643 293 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RPA2P1-201ENST00000556557 721 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 OR1E3-201ENST00000575608 948 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AP005403.1-201ENST00000579720 229 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 MIR4512-201ENST00000583257 77 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 BNIP3P16-201ENST00000589779 534 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AL031320.1-201ENST00000604177 357 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AL499605.1-201ENST00000604628 403 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AC018462.2-201ENST00000605375 395 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AC092608.2-201ENST00000624427 218 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 OR52B3P-201ENST00000314715 928 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RNU6-490P-201ENST00000362985 107 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 Y_RNA.188-201ENST00000363952 111 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RNY1P14-201ENST00000384426 108 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AL445189.1-201ENST00000405722 338 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RNU6-1050P-201ENST00000410388 107 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC093151.1-201ENST00000427711 313 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC096644.2-201ENST00000429278 159 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC007679.3-201ENST00000434035 414 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RN7SL273P-201ENST00000481561 299 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC026782.1-201ENST00000512952 449 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC026801.2-201ENST00000515352 425 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RNU2-69P-201ENST00000516061 100 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RNA5SP340-201ENST00000517132 107 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC022360.1-201ENST00000521058 340 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC022790.1-201ENST00000522872 204 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AP003396.4-201ENST00000527574 265 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AP003385.6-201ENST00000531603 374 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC079600.1-201ENST00000550326 297 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 RPL23AP84-201ENST00000571193 464 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC009229.3-201ENST00000608056 282 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC006157.1-201ENST00000611750 366 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 MIR6793-201ENST00000612376 63 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.73□□□□□ -1.65
SHISA3A0PJX4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 RNU1-115P-201ENST00000365329 160 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 Y_RNA.455-201ENST00000384230 98 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 Y_RNA.527-201ENST00000384573 102 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 GCNT1P4-201ENST00000404096 329 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC104333.2-201ENST00000422630 192 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 HMGB3P24-201ENST00000433260 622 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 PNKDP1-201ENST00000435914 430 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 RPL12P18-201ENST00000437175 325 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.72□□□□□ -1.65
SHISA3A0PJX4 FABP5P13-201ENST00000452144 328 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 RPL5P30-201ENST00000465511 891 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 RN7SL189P-201ENST00000468631 289 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AC094085.1-201ENST00000468914 584 ntBASIC4.72□□□□□ -1.65
SHISA3A0PJX4 AL122020.1-201ENST00000472287 459 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms