Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 HMGN2P7-201ENST00000456186 273 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 HMGB3P30-201ENST00000457863 606 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC026979.1-201ENST00000492525 396 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC023424.2-201ENST00000493479 777 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC010486.3-201ENST00000511602 785 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RN7SKP122-201ENST00000515923 296 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-579P-201ENST00000516879 102 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MTCO1P47-201ENST00000523889 1271 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC087373.1-201ENST00000524920 491 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CYCSP30-201ENST00000546447 172 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC011602.1-201ENST00000546484 331 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC011260.1-201ENST00000578420 472 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC244505.7-201ENST00000599675 272 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 BBIP1P1-201ENST00000602999 279 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC055876.5-201ENST00000605667 259 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC004908.3-201ENST00000610248 625 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MFSD8-236ENST00000641509 4050 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-1249P-201ENST00000363237 111 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-335P-201ENST00000364563 113 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC092447.6-201ENST00000414578 210 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC009518.2-201ENST00000418056 731 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPL21P89-201ENST00000444021 467 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC114755.5-201ENST00000447760 831 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 HMGB1P15-201ENST00000453854 435 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CEACAMP4-201ENST00000457676 421 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPS4XP10-201ENST00000465034 731 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SETP11-201ENST00000473027 690 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC104563.1-201ENST00000476147 376 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TMED11P-201ENST00000479478 690 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 HMGB1P36-201ENST00000487709 576 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC006390.1-201ENST00000508068 283 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC110768.1-201ENST00000509222 400 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TXNP6-201ENST00000510190 310 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC118465.1-201ENST00000513820 1271 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC026333.2-201ENST00000542164 106 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC006270.2-201ENST00000578523 652 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC010928.3-201ENST00000587712 541 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SNRPGP15-201ENST00000600149 222 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC004853.1-201ENST00000604902 698 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC103710.3-201ENST00000608157 948 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC012531.5-201ENST00000611375 151 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC005344.1-201ENST00000613391 459 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MIR6758-201ENST00000620653 63 ntBASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNU6-660P-201ENST00000364566 109 ntBASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNA5SP283-201ENST00000365604 119 ntBASIC3.27□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms