Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC139769.1-204ENST00000472297 1931 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC104118.1-201ENST00000607625 1589 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC144833.1-201ENST00000567953 4089 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC093671.1-201ENST00000624981 2929 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AL161756.3-201ENST00000641216 2071 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 RNU6-1249P-201ENST00000363237 111 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 SNORA41-201ENST00000384675 132 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 OR3A2-201ENST00000408891 1076 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 GAPDHP48-201ENST00000436626 961 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AL663074.2-201ENST00000440621 479 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 U8.20-201ENST00000459445 131 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 HMGB1P30-201ENST00000492455 606 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC110794.1-201ENST00000505816 425 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC022493.2-201ENST00000506122 481 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 ATP5LP3-201ENST00000514223 304 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC069113.1-201ENST00000517763 267 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC025423.5-201ENST00000550230 219 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC006115.2-201ENST00000596823 202 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AL121612.2-201ENST00000612261 482 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 AC025470.1-201ENST00000510053 2032 ntBASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXD3Q9UJU5 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 RNA5SP46-201ENST00000362370 120 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 RNU6-266P-201ENST00000364225 107 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.473-201ENST00000384333 102 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.476-201ENST00000384347 108 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 RN7SKP58-201ENST00000411010 305 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AC009310.1-201ENST00000414414 451 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AL133482.1-201ENST00000415988 498 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AL591212.2-201ENST00000433923 257 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 RHOT1P3-201ENST00000436571 331 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 HMGB3P30-201ENST00000457863 606 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AL133445.1-201ENST00000467051 452 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AC097486.1-201ENST00000515331 210 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 SCARNA16.2-201ENST00000516520 172 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 RNU6-264P-201ENST00000517134 104 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AC009812.2-201ENST00000517657 457 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AC027544.3-201ENST00000535082 757 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AL161713.1-201ENST00000555538 145 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AC127381.1-201ENST00000555979 939 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 MYL12BP1-201ENST00000569826 507 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 SNORD95-201ENST00000579879 68 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 MIR5692A1-201ENST00000580523 69 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AC012119.1-201ENST00000603184 222 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 AL589674.2-201ENST00000604304 337 ntBASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXD3Q9UJU5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms