Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RPL21P12-201ENST00000559810 515 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 CYCSP40-201ENST00000575927 294 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 MIR4700-201ENST00000578311 74 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC044792.1-201ENST00000593294 196 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC103710.2-201ENST00000609912 942 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC006329.2-201ENST00000611491 394 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC009233.1-201ENST00000616477 371 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC015914.2-201ENST00000618167 288 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC002550.2-201ENST00000621246 394 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 AC090971.4-201ENST00000560291 1800 ntBASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.57□□□□□ -1.68
KCMF1Q9P0J7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 Y_RNA.255-201ENST00000364581 97 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 RNU6-996P-201ENST00000365438 107 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 Y_RNA.367-201ENST00000365544 101 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 RNU6-339P-201ENST00000384310 107 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 MT-TC-201ENST00000387405 66 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 RNU6-278P-201ENST00000390945 109 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 U3.30-201ENST00000391308 210 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 RPL37P18-201ENST00000411602 243 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC007390.1-201ENST00000415722 356 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 RPL36AP10-201ENST00000421785 322 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 EIF4HP2-201ENST00000424380 563 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 RPS17P8-201ENST00000434525 335 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AL451139.1-201ENST00000434718 346 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AL356010.1-201ENST00000456364 102 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC090686.1-201ENST00000481577 749 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AL163973.1-201ENST00000484753 577 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 EIF4EP3-201ENST00000498782 656 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 HMGB3P16-201ENST00000508037 287 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC017037.2-201ENST00000513850 890 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 SNORD60.2-201ENST00000516883 86 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC022790.1-201ENST00000522872 204 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC011979.2-201ENST00000527568 352 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 PTP4A1P6-201ENST00000531034 478 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AL133271.1-201ENST00000538229 291 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC125611.2-201ENST00000551907 647 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 ANP32BP3-201ENST00000559213 706 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC022726.1-201ENST00000587475 207 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC013553.2-201ENST00000604244 589 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC004908.2-201ENST00000609090 574 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 MTND1P37-201ENST00000636562 264 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 IQCB2P-201ENST00000401788 1633 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 TLK1P1-201ENST00000456760 2440 ntBASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCMF1Q9P0J7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 U3.11-201ENST00000364476 212 ntBASIC4.55□□□□□ -1.68
KCMF1Q9P0J7 SNORD81.2-201ENST00000365153 76 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms