Protein–RNA interactions for Protein: Q9H4D0

CLSTN2, Calsyntenin-2, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2Q9H4D0 AC011460.1-201ENST00000636268 1834 ntBASIC3.21□□□□□ -1.89
CLSTN2Q9H4D0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 MIR208A-201ENST00000362287 71 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 RNU6-1074P-201ENST00000383995 104 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 RNU6-796P-201ENST00000391086 107 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 GSTA8P-201ENST00000404253 637 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 MIR1289-1-201ENST00000408836 144 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 RNU6-712P-201ENST00000410558 100 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 RNA5SP120-201ENST00000410900 112 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 TATDN1P1-201ENST00000414123 891 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AC073310.1-201ENST00000423226 1033 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AC079780.1-201ENST00000428259 207 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 SAR1AP4-201ENST00000429225 591 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 HMGN3P1-201ENST00000453847 193 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 RPL30P14-201ENST00000482744 348 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 OR8K4P-201ENST00000534608 872 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AL157394.1-201ENST00000562983 1224 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 MIR5004-201ENST00000579078 107 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 AC073569.3-201ENST00000619055 682 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 FAM35BP-202ENST00000497389 3337 ntBASIC3.21□□□□□ -1.9
CLSTN2Q9H4D0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 SNORA38.1-201ENST00000364172 131 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 MIR887-201ENST00000401258 79 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC006946.1-201ENST00000429106 328 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC007000.2-201ENST00000442564 487 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 RPL39P40-201ENST00000445481 146 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC004022.1-201ENST00000447766 1066 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 BX248409.1-201ENST00000455497 255 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC006445.1-201ENST00000491925 405 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 HPRT1P3-201ENST00000539521 576 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 ELOCP31-201ENST00000540463 467 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC007179.3-201ENST00000604976 235 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC106900.2-201ENST00000604994 317 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AP001033.2-201ENST00000609701 1003 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC096577.2-201ENST00000611455 153 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC068722.2-201ENST00000618734 544 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 MIR3651-201ENST00000630427 90 ntBASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLSTN2Q9H4D0 AC090740.1-201ENST00000623193 2262 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 SNORA71.1-201ENST00000364523 117 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 RPL7P10-201ENST00000417407 739 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 PTP4A1P3-201ENST00000433661 420 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AL513043.1-201ENST00000439124 535 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AL590664.1-201ENST00000448065 339 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 RN7SL504P-201ENST00000494496 287 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 BNIP3P22-201ENST00000593399 556 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 NUTF2P8-201ENST00000604593 363 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AL627309.6-201ENST00000606857 840 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AC016542.1-201ENST00000608259 493 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AC131902.3-201ENST00000611767 581 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AL163051.2-201ENST00000618976 735 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 CR381653.2-201ENST00000624041 768 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AC096644.4-201ENST00000563417 2912 ntBASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
CLSTN2Q9H4D0 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
CLSTN2Q9H4D0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.18□□□□□ -1.9
CLSTN2Q9H4D0 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
CLSTN2Q9H4D0 SNORA70.4-201ENST00000365509 134 ntBASIC3.18□□□□□ -1.9
CLSTN2Q9H4D0 MIR649-201ENST00000384843 97 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms