Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 RNA5SP305-201ENST00000362665 119 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 SNORA24.1-201ENST00000384401 135 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 RNA5SP251-201ENST00000410614 137 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 RN7SKP51-201ENST00000410781 304 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC009237.10-201ENST00000414112 510 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 BMS1P22-201ENST00000414726 313 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC114491.1-201ENST00000416095 246 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 RHOT1P3-201ENST00000436571 331 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 FTH1P1-201ENST00000437933 532 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 PPIAP10-201ENST00000438675 458 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AL031274.1-201ENST00000450334 232 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC087884.1-201ENST00000469738 328 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC117503.1-201ENST00000472241 394 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC110792.1-201ENST00000491826 472 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 RN7SL57P-201ENST00000493687 290 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 RNU6-1338P-201ENST00000516328 91 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC123768.4-201ENST00000616244 701 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 MIR6758-201ENST00000620653 63 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AP000843.1-201ENST00000624880 701 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 BDP1P-201ENST00000582658 1990 ntBASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CNTNAP3BQ96NU0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 THAP12P4-201ENST00000528321 2266 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 SNORD81.1-201ENST00000363064 77 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 Y_RNA.399-201ENST00000383955 105 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 Y_RNA.418-201ENST00000384029 102 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 RNA5SP487-201ENST00000410186 122 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 RNU6-293P-201ENST00000411259 106 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 RPL36AP13-201ENST00000457490 317 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 PPP1R11P1-201ENST00000486095 376 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 SERF1AP1-201ENST00000514575 187 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 Y_RNA.662-201ENST00000516028 97 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 RNU7-4P-201ENST00000516961 62 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 AL590240.4-201ENST00000616908 390 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 U6.106-201ENST00000636360 105 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 DNM1P47-203ENST00000571780 12667 ntBASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3BQ96NU0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC126755.2-208ENST00000327792 462 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms