Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 BNIP3P25-201ENST00000596023 559 ntBASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 SCARNA15.3-201ENST00000626315 122 ntBASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 SCARNA4.1-201ENST00000628597 123 ntBASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL13A1Q5TAT6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC233263.6-201ENST00000631132 1963 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RNU6-641P-201ENST00000384006 107 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RNU6-1029P-201ENST00000384109 107 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AL359643.1-201ENST00000404109 423 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AL121834.1-202ENST00000404494 277 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 HMGN1P24-201ENST00000412282 298 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RPL7P2-201ENST00000427639 268 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RPL7L1P10-201ENST00000427790 463 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 OR2AS1P-201ENST00000427827 319 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RPL36AP6-201ENST00000435770 321 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC104308.1-201ENST00000454621 333 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 SCARNA10-201ENST00000459255 330 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RNU6-264P-201ENST00000517134 104 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RN7SKP295-201ENST00000517264 153 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 MYL12AP1-201ENST00000518490 515 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC040958.1-201ENST00000561102 201 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 MIR4790-201ENST00000577799 79 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 COX6CP3-201ENST00000580869 223 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC069061.3-201ENST00000582254 823 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 IPO5P1-202ENST00000600039 287 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC083806.3-201ENST00000614016 455 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AL157817.1-201ENST00000614264 790 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 MTND5P28-201ENST00000438005 1594 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AL445437.1-201ENST00000623157 3087 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 MTND5P19-201ENST00000424872 1794 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 AC092079.1-201ENST00000558620 1985 ntBASIC5.75□□□□□ -1.49
COL13A1Q5TAT6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AC004944.1-201ENST00000517807 3059 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AL138713.1-201ENST00000624026 2130 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 RNA5SP90-201ENST00000364801 99 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 Y_RNA.482-201ENST00000384377 111 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 RNU6-278P-201ENST00000390945 109 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AL022722.2-201ENST00000402519 180 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 RN7SKP247-201ENST00000411094 308 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 RNU6-847P-201ENST00000411115 108 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AC068533.1-201ENST00000418542 415 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 RPL21P89-201ENST00000444021 467 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AL035666.1-201ENST00000446195 348 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AC022431.1-201ENST00000450941 438 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AC104073.1-201ENST00000451988 151 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 PLGLA-201ENST00000465668 449 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 RNU1-103P-201ENST00000516502 125 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 HMGB1P19-201ENST00000517578 577 ntBASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.74□□□□□ -1.49
COL13A1Q5TAT6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms