Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC005520.5-201ENST00000613926 164 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC243829.7-201ENST00000633081 225 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AL606537.1-201ENST00000607258 2011 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
RNFT1Q5M7Z0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.46□□□□□ -1.53
RNFT1Q5M7Z0 AL137003.2-201ENST00000606924 2538 ntBASIC5.46□□□□□ -1.53
RNFT1Q5M7Z0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
RNFT1Q5M7Z0 RBBP8P1-201ENST00000449447 1844 ntBASIC5.46□□□□□ -1.53
RNFT1Q5M7Z0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
RNFT1Q5M7Z0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
RNFT1Q5M7Z0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.46□□□□□ -1.53
RNFT1Q5M7Z0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.435-201ENST00000384095 112 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-790P-201ENST00000384479 105 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 RPS4XP7-201ENST00000406274 780 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC079355.1-201ENST00000421770 223 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 REREP1Y-201ENST00000422655 198 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 REREP2Y-201ENST00000439103 200 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 CEACAMP9-201ENST00000442990 513 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC091180.1-201ENST00000462104 372 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 RN7SL432P-201ENST00000484057 298 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 PPP1R11P1-201ENST00000486095 376 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC114728.1-201ENST00000488289 483 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC007016.1-201ENST00000512110 244 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC091144.1-201ENST00000519573 138 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AP000859.1-201ENST00000525536 307 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC012254.3-201ENST00000591183 2117 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AL136131.3-201ENST00000607600 188 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AP001784.1-201ENST00000624107 428 ntBASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNFT1Q5M7Z0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AC007785.2-201ENST00000598627 1916 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-1255P-201ENST00000363434 112 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 RNA5SP242-201ENST00000364171 118 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-946P-201ENST00000383878 107 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 RN7SKP229-201ENST00000410465 302 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AL030996.1-201ENST00000411430 235 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AC092162.1-201ENST00000432828 434 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AL451136.1-201ENST00000435399 325 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AL122020.1-201ENST00000472287 459 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 RPL31P60-201ENST00000478450 367 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 SNORD116-28-201ENST00000516123 91 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 SYF2P1-201ENST00000550658 413 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms