Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 AL389895.1-201ENST00000554127 252 ntBASIC3.82□□□□□ -1.8
LTBQ06643 SNORD39.3-201ENST00000584451 71 ntBASIC3.82□□□□□ -1.8
LTBQ06643 BNIP3P8-201ENST00000597863 560 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.82□□□□□ -1.8
LTBQ06643 BNIP3P23-201ENST00000599655 511 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC090578.1-201ENST00000604955 591 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC008250.2-201ENST00000615261 205 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.82□□□□□ -1.8
LTBQ06643 AL158209.2-201ENST00000619266 216 ntBASIC3.82□□□□□ -1.8
LTBQ06643 AC124864.2-201ENST00000624736 186 ntBASIC3.82□□□□□ -1.8
LTBQ06643 CR392039.4-201ENST00000624968 501 ntBASIC3.82□□□□□ -1.8
LTBQ06643 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.82□□□□□ -1.8
LTBQ06643 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LTBQ06643 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.82□□□□□ -1.8
LTBQ06643 AL592437.2-201ENST00000421655 2434 ntBASIC3.82□□□□□ -1.8
LTBQ06643 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LTBQ06643 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LTBQ06643 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 USP9YP4-201ENST00000424401 1745 ntBASIC3.81□□□□□ -1.8
LTBQ06643 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBQ06643 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 LINC00561-201ENST00000565815 2738 ntBASIC3.81□□□□□ -1.8
LTBQ06643 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBQ06643 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBQ06643 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
LTBQ06643 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LTBQ06643 MIR383-201ENST00000362257 73 ntBASIC3.81□□□□□ -1.8
LTBQ06643 RNU6-694P-201ENST00000364071 147 ntBASIC3.81□□□□□ -1.8
LTBQ06643 RNU1-132P-201ENST00000364300 164 ntBASIC3.81□□□□□ -1.8
LTBQ06643 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LTBQ06643 MIR7-3-201ENST00000384898 110 ntBASIC3.81□□□□□ -1.8
LTBQ06643 MIR449B-201ENST00000384995 97 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AL121972.1-201ENST00000402023 252 ntBASIC3.81□□□□□ -1.8
LTBQ06643 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 AC069157.1-201ENST00000421749 137 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AL117339.2-201ENST00000430475 180 ntBASIC3.81□□□□□ -1.8
LTBQ06643 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 GOT2P5-201ENST00000433995 546 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 AL662791.1-201ENST00000441992 928 ntBASIC3.81□□□□□ -1.8
LTBQ06643 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.81□□□□□ -1.8
LTBQ06643 MTCO1P27-201ENST00000448269 226 ntBASIC3.81□□□□□ -1.8
LTBQ06643 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 SNRPFP4-201ENST00000456366 242 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 RPL31P58-201ENST00000469001 379 ntBASIC3.81□□□□□ -1.8
LTBQ06643 KLRA1P-201ENST00000503499 986 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC139783.2-201ENST00000504847 1145 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC021678.1-201ENST00000505195 936 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 AC017037.1-201ENST00000508460 471 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 RNU6-430P-201ENST00000517078 107 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 AL121579.1-201ENST00000555129 305 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.81□□□□□ -1.8
LTBQ06643 AC137800.2-201ENST00000574375 120 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 MIR4307-201ENST00000582802 84 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC091135.1-201ENST00000585943 307 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.81□□□□□ -1.8
LTBQ06643 AL008729.2-201ENST00000606393 473 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC091965.4-201ENST00000607691 587 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 AC091304.9-201ENST00000612091 226 ntBASIC3.81□□□□□ -1.8
LTBQ06643 AL359314.1-201ENST00000616913 261 ntBASIC3.81□□□□□ -1.8
LTBQ06643 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.81□□□□□ -1.8
LTBQ06643 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBQ06643 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBQ06643 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBQ06643 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.81□□□□□ -1.8
LTBQ06643 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
LTBQ06643 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
LTBQ06643 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.81□□□□□ -1.8
LTBQ06643 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LTBQ06643 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBQ06643 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LTBQ06643 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LTBQ06643 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBQ06643 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LTBQ06643 RNA5SP513-201ENST00000364648 118 ntBASIC3.8□□□□□ -1.8
LTBQ06643 RPS3AP24-201ENST00000407896 734 ntBASIC3.8□□□□□ -1.8
LTBQ06643 RNA5SP39-201ENST00000411245 120 ntBASIC3.8□□□□□ -1.8
LTBQ06643 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.8□□□□□ -1.8
LTBQ06643 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.8□□□□□ -1.8
LTBQ06643 CCDC58P2-201ENST00000417131 366 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms