Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 RNU6-996P-201ENST00000365438 107 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 RNU4-48P-201ENST00000365559 182 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 RNU11-4P-201ENST00000391149 133 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 MED13P1-201ENST00000428342 171 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.69□□□□□ -1.66
IRF9Q00978 AC010655.1-201ENST00000449336 292 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AC006480.1-201ENST00000449887 378 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 IFNWP4-201ENST00000453148 294 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.69□□□□□ -1.66
IRF9Q00978 RN7SL610P-201ENST00000463845 291 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 RPS3AP50-201ENST00000487064 803 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.69□□□□□ -1.66
IRF9Q00978 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.69□□□□□ -1.66
IRF9Q00978 AC091868.1-201ENST00000508746 304 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.69□□□□□ -1.66
IRF9Q00978 CR383656.7-201ENST00000548164 174 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.69□□□□□ -1.66
IRF9Q00978 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.69□□□□□ -1.66
IRF9Q00978 AC022726.1-201ENST00000587475 207 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AC011712.1-201ENST00000588959 234 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.69□□□□□ -1.66
IRF9Q00978 AL121992.2-201ENST00000606262 256 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AL121612.2-201ENST00000612261 482 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AC233309.1-201ENST00000619522 751 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.69□□□□□ -1.66
IRF9Q00978 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
IRF9Q00978 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.69□□□□□ -1.66
IRF9Q00978 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.69□□□□□ -1.66
IRF9Q00978 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IRF9Q00978 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
IRF9Q00978 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
IRF9Q00978 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
IRF9Q00978 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
IRF9Q00978 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.68□□□□□ -1.66
IRF9Q00978 RIOK3P1-201ENST00000418778 1528 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.68□□□□□ -1.66
IRF9Q00978 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
IRF9Q00978 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 RPL7P26-201ENST00000333817 754 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 RNA5SP507-201ENST00000363603 121 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
IRF9Q00978 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
IRF9Q00978 AL590762.2-201ENST00000395798 571 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 AL136116.1-201ENST00000403591 381 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 RNU6-516P-201ENST00000411381 104 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 AC092447.6-201ENST00000414578 210 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.68□□□□□ -1.66
IRF9Q00978 Z74021.1-201ENST00000423610 407 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 RPL23AP38-201ENST00000423801 469 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 RPL36AP53-201ENST00000432891 316 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 RPL35AP22-201ENST00000436855 335 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 PRPF38AP2-201ENST00000438179 851 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.68□□□□□ -1.66
IRF9Q00978 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 snoU13.20-201ENST00000459180 104 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 AC006512.1-201ENST00000468816 291 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.68□□□□□ -1.66
IRF9Q00978 RNU2-10P-201ENST00000516375 211 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 RNU7-51P-201ENST00000516560 62 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 RN7SKP66-201ENST00000516681 231 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.68□□□□□ -1.66
IRF9Q00978 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 AC133555.2-201ENST00000550213 292 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 AL138976.2-201ENST00000563989 694 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 AL031176.1-201ENST00000604554 466 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 AL031666.3-201ENST00000609320 1006 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
IRF9Q00978 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
IRF9Q00978 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 FAM91A3P-201ENST00000456826 2544 ntBASIC4.68□□□□□ -1.66
IRF9Q00978 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.68□□□□□ -1.66
IRF9Q00978 MTCO1P9-201ENST00000505577 1534 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
IRF9Q00978 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
IRF9Q00978 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
IRF9Q00978 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
IRF9Q00978 NACAP2-201ENST00000318548 624 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 RNU6-263P-201ENST00000363811 107 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 RNU6-767P-201ENST00000384132 107 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 RNU6-432P-201ENST00000384196 109 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
IRF9Q00978 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
IRF9Q00978 CHEK2P3-201ENST00000416118 248 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.67□□□□□ -1.66
IRF9Q00978 OR2AS1P-201ENST00000427827 319 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms