Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC018816.2-201ENST00000621460 353 ntBASIC4.67□□□□□ -1.66
ATXN1P54253 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.67□□□□□ -1.66
ATXN1P54253 AC231657.1-201ENST00000624313 397 ntBASIC4.67□□□□□ -1.66
ATXN1P54253 AC006065.6-201ENST00000625201 545 ntBASIC4.67□□□□□ -1.66
ATXN1P54253 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.67□□□□□ -1.66
ATXN1P54253 MIR492-201ENST00000638676 116 ntBASIC4.67□□□□□ -1.66
ATXN1P54253 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.67□□□□□ -1.66
ATXN1P54253 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
ATXN1P54253 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
ATXN1P54253 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.67□□□□□ -1.66
ATXN1P54253 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATXN1P54253 AP001350.1-201ENST00000601906 1524 ntBASIC4.67□□□□□ -1.66
ATXN1P54253 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.66□□□□□ -1.66
ATXN1P54253 AL079343.1-201ENST00000572358 1771 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 SPRR2C-201ENST00000290702 219 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 RNU6-356P-201ENST00000384140 107 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 SNORA75-201ENST00000384158 137 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 RNU2-28P-201ENST00000410457 189 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 RN7SKP33-201ENST00000410942 340 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC069218.2-201ENST00000411665 344 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 RPS20P15-201ENST00000412792 311 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC011933.1-201ENST00000413334 321 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 RPS7P13-201ENST00000413955 498 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.66□□□□□ -1.66
ATXN1P54253 AL953862.1-201ENST00000423016 168 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.66□□□□□ -1.66
ATXN1P54253 AL831737.1-201ENST00000441288 271 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 IPO7P1-201ENST00000442031 636 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.66□□□□□ -1.66
ATXN1P54253 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.66□□□□□ -1.66
ATXN1P54253 AC012671.1-201ENST00000451912 203 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AL162395.1-201ENST00000457882 422 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC116533.1-201ENST00000459748 321 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC004924.1-201ENST00000480160 781 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC096576.1-201ENST00000489014 359 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC012170.1-201ENST00000495139 359 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.66□□□□□ -1.66
ATXN1P54253 AC016065.2-201ENST00000514530 444 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 RN7SKP244-201ENST00000516513 307 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 RNA5SP360-201ENST00000516555 118 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.66□□□□□ -1.66
ATXN1P54253 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.66□□□□□ -1.66
ATXN1P54253 DEFB131D-201ENST00000526803 184 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AP001004.1-201ENST00000582468 324 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.66□□□□□ -1.66
ATXN1P54253 BPIFA4P-203ENST00000603168 689 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC091805.2-201ENST00000603848 235 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AL365503.1-201ENST00000605247 905 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AC107214.2-201ENST00000608204 634 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AL159169.3-201ENST00000608871 561 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 AP001521.1-201ENST00000609150 300 ntBASIC4.66□□□□□ -1.66
ATXN1P54253 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
ATXN1P54253 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATXN1P54253 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ATXN1P54253 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATXN1P54253 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
ATXN1P54253 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
ATXN1P54253 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
ATXN1P54253 AL592182.3-201ENST00000642132 3304 ntBASIC4.65□□□□□ -1.66
ATXN1P54253 FRG1BP-201ENST00000278882 761 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 OR10J6P-201ENST00000289731 930 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 SNRPEP3-201ENST00000338402 276 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ATXN1P54253 FRG1CP-201ENST00000358464 769 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 RNU4-73P-201ENST00000363164 141 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 RNU6-433P-201ENST00000363216 104 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
ATXN1P54253 RNU6-723P-201ENST00000383973 107 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 MIR483-201ENST00000385070 76 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 MIR195-201ENST00000385194 87 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 RNU6-1009P-201ENST00000390996 107 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 AL022722.2-201ENST00000402519 180 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 FGF7P8-201ENST00000402994 292 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 MTATP6P29-201ENST00000415057 132 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 TMSB10P2-201ENST00000416049 131 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 AC012498.1-201ENST00000424037 437 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 AC096632.1-201ENST00000427395 310 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.65□□□□□ -1.67
ATXN1P54253 AL365184.2-201ENST00000431139 435 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATXN1P54253 RPEP2-201ENST00000432149 701 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 RPL29P29-201ENST00000448725 423 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 SSXP1-201ENST00000453640 473 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 MTND1P9-201ENST00000453775 944 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.65□□□□□ -1.67
ATXN1P54253 BX322784.1-201ENST00000455793 1077 ntBASIC4.65□□□□□ -1.67
ATXN1P54253 S100A11P1-201ENST00000477525 312 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms