Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RPL38P4-201ENST00000502376 214 ntBASIC3.29□□□□□ -1.88
CLIP1P30622 GZMAP1-201ENST00000503054 631 ntBASIC3.29□□□□□ -1.88
CLIP1P30622 OR4T1P-201ENST00000554933 911 ntBASIC3.29□□□□□ -1.88
CLIP1P30622 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.29□□□□□ -1.88
CLIP1P30622 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.29□□□□□ -1.88
CLIP1P30622 AC083899.3-201ENST00000603413 594 ntBASIC3.29□□□□□ -1.88
CLIP1P30622 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CLIP1P30622 SNORA26.7-201ENST00000391288 122 ntBASIC3.28□□□□□ -1.88
CLIP1P30622 AC004866.2-201ENST00000438285 481 ntBASIC3.28□□□□□ -1.88
CLIP1P30622 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.28□□□□□ -1.88
CLIP1P30622 TTC39CP1-201ENST00000512513 755 ntBASIC3.28□□□□□ -1.88
CLIP1P30622 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.28□□□□□ -1.88
CLIP1P30622 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.28□□□□□ -1.88
CLIP1P30622 AC120053.1-201ENST00000607706 736 ntBASIC3.28□□□□□ -1.88
CLIP1P30622 AL353997.5-201ENST00000618886 171 ntBASIC3.28□□□□□ -1.88
CLIP1P30622 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLIP1P30622 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.28□□□□□ -1.88
CLIP1P30622 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CLIP1P30622 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLIP1P30622 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.28□□□□□ -1.89
CLIP1P30622 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLIP1P30622 RPL31P45-201ENST00000419532 356 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 AC129850.1-201ENST00000436203 508 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 RPL7P12-201ENST00000446719 750 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 AC104435.1-201ENST00000483483 166 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 AC090543.1-201ENST00000492168 485 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 AC117522.2-201ENST00000510049 657 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.27□□□□□ -1.89
CLIP1P30622 AL022099.1-201ENST00000604551 712 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.27□□□□□ -1.89
CLIP1P30622 AF127577.6-201ENST00000623352 2191 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLIP1P30622 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLIP1P30622 RNU6-1159P-201ENST00000362933 107 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLIP1P30622 AC005517.2-201ENST00000424673 553 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.27□□□□□ -1.89
CLIP1P30622 CKS1BP2-201ENST00000497342 240 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLIP1P30622 AC091488.1-201ENST00000604239 660 ntBASIC3.27□□□□□ -1.89
CLIP1P30622 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CLIP1P30622 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
CLIP1P30622 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLIP1P30622 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLIP1P30622 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLIP1P30622 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.26□□□□□ -1.89
CLIP1P30622 SNORA26.9-201ENST00000391322 122 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 ATP5F1P6-201ENST00000402768 767 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.26□□□□□ -1.89
CLIP1P30622 USP9YP8-201ENST00000441913 500 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.26□□□□□ -1.89
CLIP1P30622 HMGB1P48-201ENST00000446155 598 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.26□□□□□ -1.89
CLIP1P30622 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.26□□□□□ -1.89
CLIP1P30622 RN7SKP282-201ENST00000516824 299 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 RN7SKP219-201ENST00000516825 296 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.26□□□□□ -1.89
CLIP1P30622 AADACP1-206ENST00000561502 1193 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 AC005951.1-201ENST00000576706 485 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.26□□□□□ -1.89
CLIP1P30622 AC011460.1-201ENST00000636268 1834 ntBASIC3.26□□□□□ -1.89
CLIP1P30622 AL592437.2-201ENST00000421655 2434 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 Y_RNA.238-201ENST00000364441 102 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 RNU6-1140P-201ENST00000410517 106 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 MORF4L1P6-201ENST00000418771 268 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 TRGV5P-201ENST00000419915 354 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 SETP8-201ENST00000435341 628 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP1P30622 AP001521.1-201ENST00000609150 300 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 Y_RNA.783-201ENST00000613546 102 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 RPL23AP61-201ENST00000623642 466 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 ZNF271P-202ENST00000465539 1970 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 AL355578.1-201ENST00000607405 1328 ntBASIC3.25□□□□□ -1.89
CLIP1P30622 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.24□□□□□ -1.89
CLIP1P30622 UBE2V2P1-201ENST00000434717 398 ntBASIC3.24□□□□□ -1.89
CLIP1P30622 AC007677.1-201ENST00000445757 515 ntBASIC3.24□□□□□ -1.89
CLIP1P30622 AC089999.1-201ENST00000460336 374 ntBASIC3.24□□□□□ -1.89
CLIP1P30622 AC072039.1-201ENST00000477611 581 ntBASIC3.24□□□□□ -1.89
CLIP1P30622 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP1P30622 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CLIP1P30622 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CLIP1P30622 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP1P30622 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CLIP1P30622 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CLIP1P30622 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLIP1P30622 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLIP1P30622 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP1P30622 PTP4A1P1-201ENST00000420539 515 ntBASIC3.23□□□□□ -1.89
CLIP1P30622 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.23□□□□□ -1.89
CLIP1P30622 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLIP1P30622 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP1P30622 AC025881.1-201ENST00000518851 512 ntBASIC3.23□□□□□ -1.89
CLIP1P30622 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.23□□□□□ -1.89
CLIP1P30622 CD24P2-201ENST00000565486 219 ntBASIC3.23□□□□□ -1.89
CLIP1P30622 AMZ2P1-203ENST00000565833 850 ntBASIC3.23□□□□□ -1.89
CLIP1P30622 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP1P30622 AP004247.3-201ENST00000608682 624 ntBASIC3.23□□□□□ -1.89
CLIP1P30622 AL512283.1-201ENST00000606756 1384 ntBASIC3.23□□□□□ -1.89
CLIP1P30622 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms