Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFRAP16234 BNIP3P38-201ENST00000601117 544 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AC009220.3-201ENST00000604318 586 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AL050303.3-201ENST00000613704 284 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 U7.8-201ENST00000619968 63 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AL357559.1-201ENST00000622228 274 ntBASIC3.69□□□□□ -1.82
PDGFRAP16234 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFRAP16234 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFRAP16234 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFRAP16234 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFRAP16234 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFRAP16234 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFRAP16234 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFRAP16234 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFRAP16234 RPS3AP25-201ENST00000411660 793 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFRAP16234 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFRAP16234 AC073063.1-201ENST00000434352 607 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 HMGN2P20-201ENST00000437531 273 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFRAP16234 PTENP1-201ENST00000447117 1215 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFRAP16234 AC087312.1-201ENST00000471411 480 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AL024509.2-201ENST00000493462 493 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 FCF1P3-201ENST00000496394 590 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFRAP16234 XKRY-201ENST00000510392 1100 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AC006499.2-201ENST00000513470 337 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 RN7SKP289-201ENST00000517244 295 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 OR5B10P-201ENST00000532869 642 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFRAP16234 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFRAP16234 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFRAP16234 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFRAP16234 AC012669.1-201ENST00000603209 283 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFRAP16234 AC091046.2-201ENST00000620775 665 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AC022149.2-201ENST00000621061 203 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AC243312.2-201ENST00000623340 601 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AC097714.1-201ENST00000511272 1647 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 AC005183.1-201ENST00000603687 1979 ntBASIC3.68□□□□□ -1.82
PDGFRAP16234 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFRAP16234 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFRAP16234 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFRAP16234 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFRAP16234 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PDGFRAP16234 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PDGFRAP16234 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFRAP16234 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PDGFRAP16234 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFRAP16234 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PDGFRAP16234 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFRAP16234 RNA5SP119-201ENST00000362715 117 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 SSR1P2-201ENST00000415208 787 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AC127526.1-201ENST00000417526 366 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 ELOCP9-201ENST00000418624 239 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AL451062.2-201ENST00000427515 271 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFRAP16234 CYCSP4-201ENST00000429682 331 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AL590233.1-201ENST00000430017 456 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.67□□□□□ -1.82
PDGFRAP16234 RPL7P52-201ENST00000449200 742 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AP001992.1-205ENST00000462248 379 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 MTND1P16-201ENST00000465177 898 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.67□□□□□ -1.82
PDGFRAP16234 MTCO2P32-201ENST00000514865 403 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 RNY4P37-201ENST00000516225 96 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFRAP16234 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.67□□□□□ -1.82
PDGFRAP16234 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.67□□□□□ -1.82
PDGFRAP16234 CCNG2P1-201ENST00000549521 1000 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 NBEAP1-201ENST00000554452 979 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.67□□□□□ -1.82
PDGFRAP16234 MIR3186-201ENST00000577404 85 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PDGFRAP16234 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFRAP16234 AC004987.4-201ENST00000603383 338 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AC024220.1-201ENST00000603675 484 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 BNIP3P11-201ENST00000603878 563 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AC131235.4-201ENST00000609288 620 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFRAP16234 AC244100.1-202ENST00000621554 382 ntBASIC3.67□□□□□ -1.82
PDGFRAP16234 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFRAP16234 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFRAP16234 AL672296.1-201ENST00000427780 2158 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFRAP16234 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFRAP16234 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFRAP16234 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFRAP16234 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFRAP16234 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PDGFRAP16234 DHFRP6-201ENST00000401776 268 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AL592310.1-201ENST00000414330 671 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC017079.2-201ENST00000416102 485 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC245052.5-201ENST00000416320 649 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC019178.2-201ENST00000423595 505 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms