Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.5□□□□□ -1.85
TOP2AP11388 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TOP2AP11388 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TOP2AP11388 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TOP2AP11388 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.5□□□□□ -1.85
TOP2AP11388 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.5□□□□□ -1.85
TOP2AP11388 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.49□□□□□ -1.85
TOP2AP11388 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.49□□□□□ -1.85
TOP2AP11388 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.49□□□□□ -1.85
TOP2AP11388 RPL23AP62-201ENST00000463396 453 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.49□□□□□ -1.85
TOP2AP11388 RPAP2P1-201ENST00000603626 1168 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 AC092650.2-201ENST00000619984 902 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.49□□□□□ -1.85
TOP2AP11388 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.49□□□□□ -1.85
TOP2AP11388 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TOP2AP11388 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TOP2AP11388 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TOP2AP11388 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TOP2AP11388 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.49□□□□□ -1.85
TOP2AP11388 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.49□□□□□ -1.85
TOP2AP11388 NDUFS5P3-201ENST00000450668 321 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 FABP5P13-201ENST00000452144 328 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 AP000852.1-201ENST00000472460 573 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 SCARNA17.1-201ENST00000516211 143 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 SCARNA17.2-201ENST00000516334 143 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 AC087241.2-201ENST00000535801 324 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.49□□□□□ -1.85
TOP2AP11388 AC090695.1-201ENST00000561269 1222 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.49□□□□□ -1.85
TOP2AP11388 SCARNA17.4-201ENST00000614296 143 ntBASIC3.49□□□□□ -1.85
TOP2AP11388 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TOP2AP11388 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TOP2AP11388 FAM35CP-201ENST00000554755 2470 ntBASIC3.48□□□□□ -1.85
TOP2AP11388 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.48□□□□□ -1.85
TOP2AP11388 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TOP2AP11388 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.48□□□□□ -1.85
TOP2AP11388 AL591719.1-201ENST00000444669 744 ntBASIC3.48□□□□□ -1.85
TOP2AP11388 AC009237.8-201ENST00000445492 379 ntBASIC3.48□□□□□ -1.85
TOP2AP11388 RNA5SP385-201ENST00000515947 110 ntBASIC3.48□□□□□ -1.85
TOP2AP11388 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.48□□□□□ -1.85
TOP2AP11388 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TOP2AP11388 OR4K11P-201ENST00000431829 904 ntBASIC3.47□□□□□ -1.85
TOP2AP11388 ATP5F1P1-201ENST00000433775 569 ntBASIC3.47□□□□□ -1.85
TOP2AP11388 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.47□□□□□ -1.85
TOP2AP11388 AC017007.3-201ENST00000479865 435 ntBASIC3.47□□□□□ -1.85
TOP2AP11388 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.47□□□□□ -1.85
TOP2AP11388 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.47□□□□□ -1.85
TOP2AP11388 AC108479.2-201ENST00000617314 601 ntBASIC3.47□□□□□ -1.85
TOP2AP11388 AC002064.3-201ENST00000623448 346 ntBASIC3.47□□□□□ -1.85
TOP2AP11388 AC091953.2-201ENST00000623979 160 ntBASIC3.47□□□□□ -1.85
TOP2AP11388 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.47□□□□□ -1.85
TOP2AP11388 AP005901.5-201ENST00000545779 1796 ntBASIC3.47□□□□□ -1.85
TOP2AP11388 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.46□□□□□ -1.86
TOP2AP11388 DYNLT3P1-201ENST00000378574 347 ntBASIC3.46□□□□□ -1.86
TOP2AP11388 AL138785.1-201ENST00000425821 331 ntBASIC3.46□□□□□ -1.86
TOP2AP11388 FAM172BP-201ENST00000487497 1089 ntBASIC3.46□□□□□ -1.86
TOP2AP11388 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.46□□□□□ -1.86
TOP2AP11388 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TOP2AP11388 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.46□□□□□ -1.86
TOP2AP11388 AC011611.5-201ENST00000552477 578 ntBASIC3.46□□□□□ -1.86
TOP2AP11388 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TOP2AP11388 MIR3683-201ENST00000580847 82 ntBASIC3.46□□□□□ -1.86
TOP2AP11388 AC128687.1-201ENST00000605304 619 ntBASIC3.46□□□□□ -1.86
TOP2AP11388 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TOP2AP11388 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
TOP2AP11388 LUZP4P1-201ENST00000415420 344 ntBASIC3.45□□□□□ -1.86
TOP2AP11388 AC087385.1-201ENST00000475062 312 ntBASIC3.45□□□□□ -1.86
TOP2AP11388 AC007182.2-201ENST00000489251 402 ntBASIC3.45□□□□□ -1.86
TOP2AP11388 HIGD1AP10-201ENST00000527837 282 ntBASIC3.45□□□□□ -1.86
TOP2AP11388 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.45□□□□□ -1.86
TOP2AP11388 snoU13.31-201ENST00000607291 104 ntBASIC3.45□□□□□ -1.86
TOP2AP11388 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
TOP2AP11388 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.45□□□□□ -1.86
TOP2AP11388 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TOP2AP11388 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TOP2AP11388 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.44□□□□□ -1.86
TOP2AP11388 AC129850.1-201ENST00000436203 508 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 USP9YP7-201ENST00000436723 430 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 AL138787.1-202ENST00000437804 898 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 USP9YP32-201ENST00000452432 430 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 TRAV11-201ENST00000539512 339 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 NSRP1P1-201ENST00000444067 1693 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 Y_RNA.338-201ENST00000365320 114 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.44□□□□□ -1.86
TOP2AP11388 AL645939.1-201ENST00000453429 797 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 CFTRP1-201ENST00000456646 183 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 RNA5SP182-201ENST00000516064 82 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.44□□□□□ -1.86
TOP2AP11388 AC004486.1-201ENST00000546846 233 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.44□□□□□ -1.86
TOP2AP11388 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.44□□□□□ -1.86
TOP2AP11388 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.44□□□□□ -1.86
TOP2AP11388 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
TOP2AP11388 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.43□□□□□ -1.86
TOP2AP11388 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TOP2AP11388 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TOP2AP11388 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.43□□□□□ -1.86
TOP2AP11388 MTCO3P30-201ENST00000426425 670 ntBASIC3.43□□□□□ -1.86
TOP2AP11388 NDUFB4P6-201ENST00000436819 366 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms