Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFBP01127 AC017037.1-201ENST00000508460 471 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.52□□□□□ -1.85
PDGFBP01127 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFBP01127 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFBP01127 AC018630.1-201ENST00000541376 925 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFBP01127 AC020914.4-201ENST00000597690 277 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AC010738.1-201ENST00000604970 987 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 OR2AS2P-201ENST00000606902 342 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AL592148.2-201ENST00000612210 372 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AC010975.3-201ENST00000618727 978 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AL360181.4-201ENST00000621752 134 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AL157770.1-201ENST00000623049 439 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AC040168.1-201ENST00000623594 991 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 CYP3A51P-201ENST00000633513 256 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 AC018555.1-201ENST00000567548 1980 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PDGFBP01127 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFBP01127 Z83843.1-201ENST00000604070 3685 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFBP01127 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFBP01127 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFBP01127 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFBP01127 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDGFBP01127 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDGFBP01127 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 RNU2-28P-201ENST00000410457 189 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 RNU4-22P-201ENST00000411058 166 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AL159169.1-201ENST00000421119 127 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AL353678.1-201ENST00000422735 741 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 USP12PY-201ENST00000427677 1064 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 NECAP1P2-201ENST00000455668 727 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 RNU7-170P-201ENST00000459303 61 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AC013828.1-201ENST00000481845 158 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFBP01127 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 AC105914.1-201ENST00000511798 226 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AC110760.3-202ENST00000515177 371 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFBP01127 AP001189.2-201ENST00000527320 189 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AC087276.1-201ENST00000529659 480 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 AC004024.1-201ENST00000549244 247 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.51□□□□□ -1.85
PDGFBP01127 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.51□□□□□ -1.85
PDGFBP01127 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFBP01127 AGGF1P5-201ENST00000567900 919 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.51□□□□□ -1.85
PDGFBP01127 MTND3P19-201ENST00000603825 345 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AL035411.2-201ENST00000604022 421 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AL162713.1-201ENST00000604480 262 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AC092954.1-201ENST00000609121 445 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AC231759.1-201ENST00000616455 597 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 AL732618.1-201ENST00000623251 301 ntBASIC3.51□□□□□ -1.85
PDGFBP01127 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFBP01127 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFBP01127 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.5□□□□□ -1.85
PDGFBP01127 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFBP01127 AC007256.1-201ENST00000392253 2765 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 Z99496.1-201ENST00000469424 1477 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFBP01127 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFBP01127 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PDGFBP01127 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PDGFBP01127 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 MIR591-201ENST00000385290 95 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 RNU6-1300P-201ENST00000391046 108 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 U3.29-201ENST00000391296 212 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AL079342.2-201ENST00000403367 482 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AL138885.1-201ENST00000405921 675 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 RN7SKP56-201ENST00000410513 331 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 RN7SKP53-201ENST00000411337 315 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 GTF2IP23-201ENST00000423746 351 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 DUTP6-201ENST00000425573 462 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 MTCO1P3-201ENST00000429327 192 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 RPL32P28-201ENST00000443577 397 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 HMGB3P6-201ENST00000444896 598 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AL049830.2-201ENST00000480072 201 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 TRBV12-2-201ENST00000489763 344 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 AC021146.1-201ENST00000511202 716 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms