Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SRGNP1-201ENST00000603392 451 ntBASIC2.86□□□□□ -1.95
SEMA3DO95025 RPL23AP88-201ENST00000605759 454 ntBASIC2.86□□□□□ -1.95
SEMA3DO95025 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.86□□□□□ -1.95
SEMA3DO95025 AP004247.3-201ENST00000608682 624 ntBASIC2.86□□□□□ -1.95
SEMA3DO95025 AC139713.2-210ENST00000641741 992 ntBASIC2.86□□□□□ -1.95
SEMA3DO95025 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
SEMA3DO95025 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SEMA3DO95025 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.86□□□□□ -1.95
SEMA3DO95025 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
SEMA3DO95025 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SEMA3DO95025 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SEMA3DO95025 RNU6-263P-201ENST00000363811 107 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SEMA3DO95025 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SEMA3DO95025 MIR23B-201ENST00000384832 97 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.85□□□□□ -1.95
SEMA3DO95025 MIR1289-1-201ENST00000408836 144 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 RPS3AP9-201ENST00000417027 792 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 AC009237.2-201ENST00000421358 284 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.85□□□□□ -1.95
SEMA3DO95025 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.85□□□□□ -1.95
SEMA3DO95025 AC114973.1-201ENST00000429057 632 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.85□□□□□ -1.95
SEMA3DO95025 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.85□□□□□ -1.95
SEMA3DO95025 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.85□□□□□ -1.95
SEMA3DO95025 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.85□□□□□ -1.95
SEMA3DO95025 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.85□□□□□ -1.95
SEMA3DO95025 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 OR6K1P-201ENST00000456766 971 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 RPL21P131-201ENST00000497298 483 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 AC011352.3-201ENST00000505162 593 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 SLC25A15P5-201ENST00000508033 253 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.85□□□□□ -1.95
SEMA3DO95025 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.85□□□□□ -1.95
SEMA3DO95025 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.85□□□□□ -1.95
SEMA3DO95025 AC124293.1-201ENST00000530034 493 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 HSPE1P20-201ENST00000538133 289 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 AC092470.1-201ENST00000546187 132 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.85□□□□□ -1.95
SEMA3DO95025 AC107016.2-201ENST00000547968 190 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SEMA3DO95025 MIR4789-201ENST00000577469 82 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 AC007318.2-201ENST00000620999 243 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 AL590396.4-201ENST00000636779 956 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 MTCO1P4-201ENST00000520516 1409 ntBASIC2.85□□□□□ -1.95
SEMA3DO95025 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SEMA3DO95025 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.84□□□□□ -1.95
SEMA3DO95025 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AC092447.7-201ENST00000422212 1621 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
SEMA3DO95025 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SEMA3DO95025 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SEMA3DO95025 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.84□□□□□ -1.95
SEMA3DO95025 RNU6-609P-201ENST00000365459 107 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.84□□□□□ -1.95
SEMA3DO95025 RNU6-837P-201ENST00000391056 108 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AP002784.2-201ENST00000397300 549 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 SSXP10-201ENST00000402595 565 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 SNORA11-201ENST00000408789 128 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 RPL19P1-201ENST00000411635 428 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 UBE2V1P9-201ENST00000414760 368 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 DEFB130D-201ENST00000426866 237 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 UBE2D3P3-201ENST00000426992 425 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 RPL39P40-201ENST00000445481 146 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 Z96811.1-201ENST00000445880 108 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.84□□□□□ -1.95
SEMA3DO95025 RNU7-140P-201ENST00000459546 60 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 NAP1L1P3-201ENST00000462291 880 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 HMGB1P25-201ENST00000468402 607 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC010285.1-201ENST00000470580 392 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 RPL7P49-201ENST00000471402 708 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 RPS29P2-201ENST00000479278 136 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 OR2A20P-203ENST00000498397 1268 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SEMA3DO95025 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AC008885.1-201ENST00000514930 301 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 RNU6-334P-201ENST00000517072 102 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AC022690.1-201ENST00000526681 550 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AP003049.1-201ENST00000529418 457 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AC074050.1-201ENST00000563247 211 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC034105.3-201ENST00000565294 442 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC107954.1-201ENST00000565906 727 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC006539.2-201ENST00000601729 572 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC091057.2-201ENST00000602594 792 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 BNIP3P11-201ENST00000603878 563 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AL159169.3-201ENST00000608871 561 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC107871.2-201ENST00000612894 502 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 AC097372.4-201ENST00000625025 466 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.84□□□□□ -1.95
SEMA3DO95025 AC068620.4-201ENST00000636730 1182 ntBASIC2.84□□□□□ -1.95
SEMA3DO95025 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SEMA3DO95025 ZNF807-201ENST00000328088 1707 ntBASIC2.84□□□□□ -1.96
SEMA3DO95025 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms