Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNU6-1095P-201ENST00000516148 108 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 SNORA31.8-201ENST00000516327 108 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 NDUFB9P3-201ENST00000521269 501 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX39AO00148 AL163153.1-201ENST00000554223 283 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 AL391156.1-201ENST00000554965 554 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX39AO00148 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX39AO00148 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX39AO00148 FAM60BP-201ENST00000578364 658 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX39AO00148 AC012493.2-201ENST00000595083 291 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 AL034351.1-201ENST00000605288 668 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 YPEL5P2-201ENST00000605553 359 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 AC073657.2-201ENST00000605661 303 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 AL157817.1-201ENST00000614264 790 ntBASIC3.66□□□□□ -1.82
DDX39AO00148 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX39AO00148 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.65□□□□□ -1.82
DDX39AO00148 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
DDX39AO00148 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX39AO00148 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX39AO00148 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX39AO00148 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX39AO00148 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX39AO00148 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
DDX39AO00148 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX39AO00148 AC109780.2-201ENST00000413467 845 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AL353678.1-201ENST00000422735 741 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX39AO00148 RFC5P1-201ENST00000454419 874 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX39AO00148 AC087312.1-201ENST00000471411 480 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX39AO00148 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX39AO00148 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX39AO00148 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX39AO00148 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX39AO00148 AC125611.1-201ENST00000549563 229 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 GTF2IP8-201ENST00000560687 584 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AC141257.3-201ENST00000572906 215 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX39AO00148 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX39AO00148 SNORD39.4-201ENST00000620099 78 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 MIR8057-201ENST00000620957 69 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AL353748.2-201ENST00000622148 471 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AP000720.1-201ENST00000625091 483 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX39AO00148 U6.101-201ENST00000637707 76 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
DDX39AO00148 PWAR6-201ENST00000552334 4618 ntBASIC3.65□□□□□ -1.83
DDX39AO00148 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX39AO00148 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX39AO00148 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
DDX39AO00148 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX39AO00148 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX39AO00148 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DDX39AO00148 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX39AO00148 RNU6-1257P-201ENST00000384625 110 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 MIR128-1-201ENST00000384921 82 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.64□□□□□ -1.83
DDX39AO00148 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX39AO00148 RPL21P32-201ENST00000419877 477 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX39AO00148 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX39AO00148 CYCSP32-201ENST00000440548 321 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 AL671855.1-201ENST00000446875 1203 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 AC112492.1-201ENST00000449607 712 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
DDX39AO00148 AC069528.1-202ENST00000482888 637 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
DDX39AO00148 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX39AO00148 SUMO2P5-201ENST00000506790 245 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX39AO00148 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX39AO00148 LRRC6P1-201ENST00000532188 885 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX39AO00148 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX39AO00148 COX6CP3-201ENST00000580869 223 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX39AO00148 AC006254.3-201ENST00000603353 884 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 AC110801.1-201ENST00000623590 212 ntBASIC3.64□□□□□ -1.83
DDX39AO00148 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX39AO00148 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX39AO00148 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DDX39AO00148 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX39AO00148 AC021755.1-201ENST00000559747 1447 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX39AO00148 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX39AO00148 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.63□□□□□ -1.83
DDX39AO00148 RNU6-173P-201ENST00000364215 104 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 SNORA48.2-201ENST00000390926 124 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 SNRPEP2-201ENST00000397592 279 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 HMGB3P23-201ENST00000414981 585 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 AL137014.1-201ENST00000420490 1226 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 PSMA6P3-201ENST00000428242 164 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 RPL23AP74-201ENST00000437246 471 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 CST9LP2-201ENST00000437612 320 ntBASIC3.63□□□□□ -1.83
DDX39AO00148 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
DDX39AO00148 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms