Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF223E7ERA6 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF223E7ERA6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNF223E7ERA6 AC073365.1-203ENST00000641055 1992 ntBASIC5.51□□□□□ -1.53
RNF223E7ERA6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF223E7ERA6 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF223E7ERA6 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF223E7ERA6 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF223E7ERA6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RNF223E7ERA6 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 UBE2L2-201ENST00000254302 429 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 SNORA70.3-201ENST00000365075 132 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 Y_RNA.337-201ENST00000365312 102 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 OR1L6-202ENST00000373684 1044 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 MIR32-201ENST00000384965 70 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 MIR153-2-201ENST00000385225 87 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 ENSAP1-201ENST00000392855 326 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 RN7SKP284-201ENST00000411002 343 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 AL138785.1-201ENST00000425821 331 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 RPS15AP5-201ENST00000436276 388 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC022431.1-201ENST00000450941 438 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC009963.3-201ENST00000458090 486 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 RPL21P126-201ENST00000470049 478 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 RPL21P13-201ENST00000488305 481 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 RNA5SP418-201ENST00000515951 117 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 IGKV2D-36-201ENST00000518643 226 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 HMGB1P14-201ENST00000557424 591 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC022968.1-201ENST00000567372 442 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 AC022441.3-201ENST00000605737 136 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 U1.41-201ENST00000617626 165 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 MIR6811-201ENST00000620409 58 ntBASIC5.5□□□□□ -1.53
RNF223E7ERA6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RNF223E7ERA6 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF223E7ERA6 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF223E7ERA6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF223E7ERA6 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF223E7ERA6 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF223E7ERA6 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF223E7ERA6 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF223E7ERA6 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF223E7ERA6 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 RPL12P13-201ENST00000310055 497 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 RNU6-578P-201ENST00000390980 103 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 RNU6-381P-201ENST00000391259 108 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 RPL12P16-201ENST00000431098 498 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF223E7ERA6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 RPS14P8-201ENST00000478778 369 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 RPS4XP23-201ENST00000487801 237 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 AC006499.6-201ENST00000511169 607 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 RFPL4AP5-201ENST00000514977 504 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 HIGD1AP3-201ENST00000515857 278 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 AL391261.3-201ENST00000557194 520 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 MIR4744-201ENST00000581563 82 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 AC234771.5-201ENST00000600161 514 ntBASIC5.49□□□□□ -1.53
RNF223E7ERA6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF223E7ERA6 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms