Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 ELF2P3-201ENST00000445099 1506 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 Y_RNA.9-201ENST00000362354 101 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RNU6-1103P-201ENST00000384150 107 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 Y_RNA.554-201ENST00000384672 102 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 MIR153-1-201ENST00000384914 90 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 CIR1P3-201ENST00000405137 479 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RNA5SP56-201ENST00000410277 118 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RNU6-195P-201ENST00000411352 109 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC245052.5-201ENST00000416320 649 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC127526.1-201ENST00000417526 366 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RPL23AP25-201ENST00000430973 463 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RPL23AP33-201ENST00000442301 452 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AL590399.6-201ENST00000446396 307 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AL671855.1-201ENST00000446875 1203 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC003071.1-201ENST00000451219 789 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC104308.1-201ENST00000454621 333 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RPL23AP24-201ENST00000458203 385 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RPL21P103-201ENST00000479921 488 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC116353.2-201ENST00000505332 712 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 PTGES3P3-201ENST00000511479 482 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 SAP18P1-201ENST00000512058 390 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RNA5SP446-201ENST00000515955 82 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 Vault.3-201ENST00000516676 95 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 OR4P1P-201ENST00000530808 1136 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 SETP7-201ENST00000552169 453 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AL845331.3-202ENST00000562856 261 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC007224.1-201ENST00000564410 144 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 MIR3118-1-201ENST00000581787 76 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC011451.2-201ENST00000604303 598 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AL451044.1-201ENST00000604867 238 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 U73479.1-201ENST00000618062 168 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 U6.42-201ENST00000618440 107 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC005086.4-201ENST00000623065 213 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC005609.4-201ENST00000625071 447 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 CR848007.1-201ENST00000442354 1699 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 NEAT1-202ENST00000501122 22743 ntBASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB1Q9Y5F3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.53□□□□□ -1.69
PCDHB1Q9Y5F3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 SNORA37-201ENST00000384504 129 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 SNORD96B-201ENST00000386148 79 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC006548.1-201ENST00000427470 102 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC133104.1-201ENST00000429100 218 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC079448.1-201ENST00000449377 373 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 C1DP4-201ENST00000455429 424 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC053481.1-201ENST00000467217 306 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC055855.1-201ENST00000489563 579 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 MTCO1P35-201ENST00000515270 228 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 RNU6-718P-201ENST00000516166 105 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms