Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RPS3AP26-201ENST00000398259 784 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC073310.1-201ENST00000423226 1033 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC093422.3-201ENST00000428506 305 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 PTP4A1P3-201ENST00000433661 420 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 SNRPEP4-201ENST00000435815 279 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 RAB11AP1-201ENST00000442978 646 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC093392.2-201ENST00000450682 337 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 BX248409.1-201ENST00000455497 255 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 RPS27P23-201ENST00000487608 251 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC080014.1-201ENST00000496877 1201 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 MTCYBP37-201ENST00000510642 1133 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 RNU6-362P-201ENST00000516736 90 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC103833.1-201ENST00000517442 172 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 SNORD84-203ENST00000584275 78 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC006539.2-201ENST00000601729 572 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 BDH2P1-201ENST00000602288 736 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 XIAPP1-201ENST00000603162 600 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC006023.1-201ENST00000603944 259 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC128687.1-201ENST00000605304 619 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC097372.4-201ENST00000625025 466 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AC139713.2-210ENST00000641741 992 ntBASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTNNA3Q9UI47 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 RNU6-1249P-201ENST00000363237 111 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 RNU6-1077P-201ENST00000410506 102 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 RNA5SP344-201ENST00000411081 104 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AL390023.1-201ENST00000428836 262 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC107083.1-201ENST00000439643 279 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AL513321.1-201ENST00000441175 761 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC091179.1-201ENST00000461606 579 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 HMGB1P25-201ENST00000468402 607 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 OR2A20P-203ENST00000498397 1268 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 PRELID3BP6-201ENST00000503839 571 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC105914.1-201ENST00000511798 226 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC118465.1-201ENST00000513820 1271 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 RN7SKP43-201ENST00000516173 320 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 MIR1264-201ENST00000616374 69 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC073569.3-201ENST00000619055 682 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC006111.3-201ENST00000622137 383 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC095031.1-201ENST00000623685 672 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AC090897.3-201ENST00000636973 1157 ntBASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CTNNA3Q9UI47 AL355596.1-201ENST00000565399 3996 ntBASIC3.59□□□□□ -1.84
CTNNA3Q9UI47 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CTNNA3Q9UI47 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CTNNA3Q9UI47 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.59□□□□□ -1.84
CTNNA3Q9UI47 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 HMGN3P1-201ENST00000453847 193 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AL445669.2-201ENST00000454425 421 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 GAPDHP39-201ENST00000481866 979 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 RN7SL633P-201ENST00000488974 297 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 HIGD1AP6-201ENST00000521833 279 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC022690.1-201ENST00000526681 550 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 H3F3AP1-201ENST00000559984 334 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC087481.2-201ENST00000565492 330 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 COX6CP3-201ENST00000580869 223 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 MAGOH2P-202ENST00000584384 429 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC073387.2-201ENST00000604797 784 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AC112503.2-201ENST00000609005 552 ntBASIC3.58□□□□□ -1.84
CTNNA3Q9UI47 AP001033.2-201ENST00000609701 1003 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms