Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 RNU6-254P-201ENST00000363377 107 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 Y_RNA.216-201ENST00000364205 93 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 RNU6-744P-201ENST00000365557 107 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 RNU6-1316P-201ENST00000384242 108 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 RNU6-738P-201ENST00000384531 106 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC016769.3-201ENST00000396562 315 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 ARF4P3-201ENST00000397387 509 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC078974.1-201ENST00000411597 223 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 VN1R36P-201ENST00000414936 291 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC013429.2-201ENST00000418798 781 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 ELOCP4-201ENST00000420090 333 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AL353777.1-201ENST00000425552 326 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 RPL7L1P1-201ENST00000448259 785 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 RPS5P7-201ENST00000456664 608 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC010326.1-201ENST00000462726 602 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC087385.1-201ENST00000475062 312 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 RPL12P20-201ENST00000475538 479 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 TRMT10BP1-201ENST00000519377 943 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 GSTP1P1-201ENST00000548078 319 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AL352979.3-201ENST00000553515 247 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC093249.1-201ENST00000567049 203 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 MIR3171-201ENST00000584270 74 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC067852.4-201ENST00000590314 478 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AL391813.2-201ENST00000609113 322 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 BX664608.1-201ENST00000610519 487 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC008121.3-201ENST00000618726 433 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 LINC01355-201ENST00000566551 5444 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 Z95331.1-201ENST00000623075 23112 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 RPL7P26-201ENST00000333817 754 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 RNU6-343P-201ENST00000364709 104 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 UBBP2-201ENST00000376781 231 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 Y_RNA.384-201ENST00000383909 102 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 RPL21P67-201ENST00000402896 478 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 NDUFB4P5-201ENST00000415445 361 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 RPS7P15-201ENST00000415804 584 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 BX510359.2-201ENST00000417920 305 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC119618.1-201ENST00000434191 222 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AL359265.2-201ENST00000434367 631 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC009220.1-201ENST00000451614 275 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 BX276092.4-201ENST00000452056 248 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 MRPS17P3-201ENST00000465453 385 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AP001025.2-201ENST00000490908 477 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 RN7SKP277-201ENST00000516895 283 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 PTP4A1P6-201ENST00000531034 478 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC087241.2-201ENST00000535801 324 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC092470.1-201ENST00000546187 132 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC133555.2-201ENST00000550213 292 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 HSPE1P3-201ENST00000559254 309 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC209154.1-201ENST00000582156 337 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms