Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC098479.1-201ENST00000609225 154 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AL161616.1-201ENST00000611867 286 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 MIR6754-201ENST00000621121 66 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 MIR6723-201ENST00000621981 89 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 FP236240.3-201ENST00000623061 327 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ERVFRD-3-201ENST00000578561 1617 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 CPS1-IT1-201ENST00000628368 2306 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AL034549.2-201ENST00000618285 3373 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AC104260.2-201ENST00000623551 3497 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 AC073136.1-201ENST00000449426 2884 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 AC138393.1-203ENST00000327086 343 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 MIR412-201ENST00000362142 91 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 RNY1P16-201ENST00000363063 111 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.117-201ENST00000363294 101 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 RNU6-238P-201ENST00000363313 106 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.151-201ENST00000363566 112 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.314-201ENST00000365114 102 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 U8.8-201ENST00000365399 135 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 RNU6-611P-201ENST00000384276 104 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.785-201ENST00000384290 109 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 SNORA35-201ENST00000386104 128 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 RNA5SP176-201ENST00000390956 110 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 RAN-201ENST00000392367 780 ntTSL 5 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 UBBP1-201ENST00000392399 473 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 AL445529.1-201ENST00000398713 389 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 AL136100.1-201ENST00000407696 330 ntBASIC1.67□□□□□ -2.14
LCE3DQ9BYE3 MTCYBP2-201ENST00000407745 171 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms