Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCRAQ6ISU1 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
PTCRAQ6ISU1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCRAQ6ISU1 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 DDX10P1-201ENST00000448545 1933 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 GTF2IP4-201ENST00000453092 2054 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 RNA5SP305-201ENST00000362665 119 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 MIR92A2-201ENST00000385299 75 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 EI24P4-201ENST00000423683 1078 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 OR4C10P-201ENST00000434991 931 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC053481.1-201ENST00000467217 306 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 RPL32P33-201ENST00000487023 394 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC008716.1-201ENST00000511084 513 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC107393.1-201ENST00000512403 346 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 RNU6-677P-201ENST00000516914 101 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC021678.3-201ENST00000517893 476 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AP006587.4-201ENST00000526053 529 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 MRPS21P7-201ENST00000566937 238 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 MIR4480-201ENST00000582492 71 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 FP236240.3-201ENST00000623061 327 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC132068.1-201ENST00000623805 459 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCRAQ6ISU1 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 RNVU1-3-201ENST00000364313 161 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 MIR215-201ENST00000384858 110 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 SNORD115-46-201ENST00000390982 71 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AL109941.1-201ENST00000401925 229 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AL590704.1-201ENST00000402856 794 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 CYP4F30P-202ENST00000420048 405 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC010655.1-201ENST00000449336 292 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC022431.1-201ENST00000450941 438 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC010631.1-201ENST00000474150 156 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 RPS4XP20-201ENST00000505751 772 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 RNU6-352P-201ENST00000516908 107 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC091144.1-201ENST00000519573 138 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC087441.2-201ENST00000529141 262 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC025884.1-201ENST00000556034 378 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC025588.3-201ENST00000604182 274 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AC139493.1-201ENST00000604368 397 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 HSPA8P1-201ENST00000425843 1833 ntBASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PTCRAQ6ISU1 MAPK10-344ENST00000641718 3746 ntBASIC6.03□□□□□ -1.44
PTCRAQ6ISU1 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCRAQ6ISU1 AC008957.3-201ENST00000624112 2242 ntBASIC6.03□□□□□ -1.44
PTCRAQ6ISU1 Z75746.1-201ENST00000440243 2080 ntBASIC6.03□□□□□ -1.44
PTCRAQ6ISU1 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCRAQ6ISU1 AP000560.1-201ENST00000624150 1937 ntBASIC6.03□□□□□ -1.44
PTCRAQ6ISU1 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms