Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.21□□□□□ -1.58
ITGA4P13612 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ITGA4P13612 AC009643.2-201ENST00000603543 1448 ntBASIC5.21□□□□□ -1.58
ITGA4P13612 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ITGA4P13612 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ITGA4P13612 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.21□□□□□ -1.58
ITGA4P13612 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ITGA4P13612 AC009902.3-201ENST00000606235 2172 ntBASIC5.21□□□□□ -1.58
ITGA4P13612 AP000542.2-201ENST00000623199 6179 ntBASIC5.21□□□□□ -1.58
ITGA4P13612 TLK1P1-201ENST00000456760 2440 ntBASIC5.21□□□□□ -1.58
ITGA4P13612 SMG1P6-201ENST00000532337 2930 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AC011978.2-201ENST00000569835 2054 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 AL031119.1-201ENST00000404707 1879 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AL442639.1-201ENST00000625030 1899 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 RNA5SP332-201ENST00000391063 115 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AL049697.2-201ENST00000403708 294 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AC127526.1-201ENST00000417526 366 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AL365400.1-201ENST00000431854 640 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 CEACAMP1-201ENST00000434624 1035 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 UBE2V1P13-201ENST00000436983 439 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.2□□□□□ -1.58
ITGA4P13612 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 NANOGP10-201ENST00000453325 895 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.2□□□□□ -1.58
ITGA4P13612 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 AC078785.3-201ENST00000476607 425 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 EIF4EP3-201ENST00000498782 656 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AC091868.1-201ENST00000508746 304 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.2□□□□□ -1.58
ITGA4P13612 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.2□□□□□ -1.58
ITGA4P13612 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.2□□□□□ -1.58
ITGA4P13612 RNU6-709P-201ENST00000517257 104 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.2□□□□□ -1.58
ITGA4P13612 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.2□□□□□ -1.58
ITGA4P13612 HPRT1P3-201ENST00000539521 576 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AC023050.3-201ENST00000541142 333 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.2□□□□□ -1.58
ITGA4P13612 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.2□□□□□ -1.58
ITGA4P13612 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.2□□□□□ -1.58
ITGA4P13612 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.2□□□□□ -1.58
ITGA4P13612 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.2□□□□□ -1.58
ITGA4P13612 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.2□□□□□ -1.58
ITGA4P13612 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 AC209154.1-201ENST00000582156 337 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.2□□□□□ -1.58
ITGA4P13612 KC877982.1-201ENST00000602313 470 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 AL050343.2-201ENST00000607338 280 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.2□□□□□ -1.58
ITGA4P13612 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.2□□□□□ -1.58
ITGA4P13612 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 AC104260.2-201ENST00000623551 3497 ntBASIC5.2□□□□□ -1.58
ITGA4P13612 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ITGA4P13612 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.2□□□□□ -1.58
ITGA4P13612 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ITGA4P13612 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
ITGA4P13612 AC008079.2-201ENST00000623543 20396 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ITGA4P13612 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.19□□□□□ -1.58
ITGA4P13612 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ITGA4P13612 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.19□□□□□ -1.58
ITGA4P13612 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ITGA4P13612 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.19□□□□□ -1.58
ITGA4P13612 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ITGA4P13612 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
ITGA4P13612 Y_RNA.255-201ENST00000364581 97 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ITGA4P13612 RNU6-332P-201ENST00000391193 108 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 RPL32P23-201ENST00000397237 405 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 AL136116.1-201ENST00000403591 381 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.19□□□□□ -1.58
ITGA4P13612 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.19□□□□□ -1.58
ITGA4P13612 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.19□□□□□ -1.58
ITGA4P13612 AL353678.1-201ENST00000422735 741 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 AL645608.4-201ENST00000423619 154 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 RPL35AP12-201ENST00000425362 338 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 AL451139.1-201ENST00000434718 346 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 AC127537.2-201ENST00000439258 465 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 MRPL50P4-201ENST00000446432 475 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 AL031584.1-201ENST00000447169 754 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 CEACAMP6-201ENST00000452007 574 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 AL356010.1-201ENST00000456364 102 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 RPS4XP10-201ENST00000465034 731 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 HMGB1P21-201ENST00000502313 581 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 AC020893.1-201ENST00000502452 580 ntBASIC5.19□□□□□ -1.58
ITGA4P13612 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.19□□□□□ -1.58
ITGA4P13612 RN7SKP92-201ENST00000517266 244 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms