Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.71□□□□□ -1.82
NKX2-2O95096 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.71□□□□□ -1.82
NKX2-2O95096 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX2-2O95096 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.71□□□□□ -1.82
NKX2-2O95096 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX2-2O95096 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX2-2O95096 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX2-2O95096 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX2-2O95096 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NKX2-2O95096 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-2O95096 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-2O95096 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX2-2O95096 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
NKX2-2O95096 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-2O95096 RPL32P3-201ENST00000359025 275 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 RNA5SP189-201ENST00000364920 115 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 SNORA62-201ENST00000365493 153 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 SNORA70C-201ENST00000384538 135 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 U3.20-201ENST00000390909 217 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 RPS26P8-201ENST00000393490 348 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL022722.2-201ENST00000402519 180 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 RPL17P12-201ENST00000413391 526 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC004552.1-201ENST00000419089 348 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-2O95096 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-2O95096 NANOGP6-201ENST00000429190 847 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-2O95096 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-2O95096 AC083863.1-201ENST00000438811 231 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 KATNBL1P3-201ENST00000443475 909 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC112653.1-201ENST00000443851 386 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-2O95096 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX2-2O95096 RPS11P1-201ENST00000451072 473 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX2-2O95096 RPS26P3-201ENST00000470205 348 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AP000797.1-201ENST00000478870 387 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC090543.2-201ENST00000483963 348 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC004057.1-201ENST00000485827 348 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 RPS26P15-201ENST00000488067 348 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL132838.2-201ENST00000492041 314 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC093278.1-201ENST00000494700 600 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL139099.1-201ENST00000497398 403 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-2O95096 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-2O95096 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-2O95096 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-2O95096 SETP2-201ENST00000553886 926 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC009101.1-201ENST00000568135 242 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 UBE2L4-201ENST00000587688 464 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL591034.3-201ENST00000605511 685 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AC135507.1-201ENST00000607214 561 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 RNU4-89P-201ENST00000607443 133 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL391497.1-201ENST00000608671 547 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 MIR378J-201ENST00000611988 109 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL158063.1-201ENST00000615349 536 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL158801.5-201ENST00000623123 465 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 AL356121.2-201ENST00000624715 780 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-2O95096 AC093591.3-201ENST00000634516 308 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 MTND4P4-201ENST00000439033 1366 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-2O95096 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-2O95096 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NKX2-2O95096 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-2O95096 AP001350.1-201ENST00000601906 1524 ntBASIC3.7□□□□□ -1.82
NKX2-2O95096 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-2O95096 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 AC009902.3-201ENST00000606235 2172 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX2-2O95096 AP002001.2-201ENST00000529025 1469 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 MTND5P33-201ENST00000571250 1450 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NKX2-2O95096 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX2-2O95096 RNA5SP399-201ENST00000364003 117 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC068538.1-201ENST00000376856 336 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 RNU6-1181P-201ENST00000384191 106 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 MIR607-201ENST00000385241 96 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AL121834.1-202ENST00000404494 277 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 RPL7AP73-201ENST00000413490 353 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 SEPT2P1-201ENST00000419651 180 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 KCTD9P3-201ENST00000434597 1169 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 MTND4P32-201ENST00000437189 1237 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX2-2O95096 COX6CP2-201ENST00000444980 225 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC010655.1-201ENST00000449336 292 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AP1S2P1-201ENST00000457344 379 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 RPS7P7-201ENST00000463499 571 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX2-2O95096 RPL7P23-201ENST00000493874 747 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC080014.1-201ENST00000496877 1201 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC096751.1-202ENST00000502691 1067 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-2O95096 AC117532.1-201ENST00000514638 323 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 RNU6-1003P-201ENST00000517099 105 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms