Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NPHP4O75161 AL592045.1-201ENST00000429867 352 ntBASIC3.41□□□□□ -1.86
NPHP4O75161 AC010881.1-201ENST00000433830 235 ntBASIC3.41□□□□□ -1.86
NPHP4O75161 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHP4O75161 AL590399.6-201ENST00000446396 307 ntBASIC3.41□□□□□ -1.86
NPHP4O75161 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHP4O75161 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHP4O75161 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP4O75161 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHP4O75161 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.41□□□□□ -1.86
NPHP4O75161 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP4O75161 AC015726.3-201ENST00000624501 418 ntBASIC3.41□□□□□ -1.86
NPHP4O75161 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP4O75161 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.4□□□□□ -1.86
NPHP4O75161 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NPHP4O75161 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
NPHP4O75161 RPL31P52-201ENST00000407532 367 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 AC013404.1-201ENST00000413068 249 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 RPL7P53-201ENST00000421245 739 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 AC244505.4-201ENST00000434905 287 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 SSXP5-201ENST00000443473 287 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.4□□□□□ -1.87
NPHP4O75161 GAPDHP27-201ENST00000447427 1020 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.4□□□□□ -1.87
NPHP4O75161 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.4□□□□□ -1.87
NPHP4O75161 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPHP4O75161 MIR4716-201ENST00000579628 84 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.4□□□□□ -1.87
NPHP4O75161 AP003117.2-201ENST00000606010 545 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 AC139769.3-201ENST00000618383 175 ntBASIC3.4□□□□□ -1.87
NPHP4O75161 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NPHP4O75161 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPHP4O75161 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NPHP4O75161 AL136964.1-201ENST00000622038 2990 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
NPHP4O75161 RNU6-819P-201ENST00000364116 107 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPHP4O75161 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.39□□□□□ -1.87
NPHP4O75161 MTCYBP12-201ENST00000440559 1134 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 AL645939.1-201ENST00000453429 797 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 RN7SKP210-201ENST00000459176 261 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 AC104090.1-201ENST00000506341 1171 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 AC117522.2-201ENST00000510049 657 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 AC026436.1-201ENST00000510537 270 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 RNU6-491P-201ENST00000516099 110 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 OR5BN1P-201ENST00000532955 829 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 SNRPGP18-201ENST00000553000 214 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 AC084757.1-201ENST00000559987 490 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.39□□□□□ -1.87
NPHP4O75161 AL512643.1-201ENST00000635735 524 ntBASIC3.39□□□□□ -1.87
NPHP4O75161 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPHP4O75161 NSRP1P1-201ENST00000444067 1693 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 AC069528.2-201ENST00000624849 1991 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP4O75161 U8.13-201ENST00000390842 128 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP4O75161 RN7SKP140-201ENST00000411196 284 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NPHP4O75161 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP4O75161 AP002345.1-201ENST00000456493 928 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP4O75161 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP4O75161 AC108729.3-201ENST00000513484 108 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.38□□□□□ -1.87
NPHP4O75161 CKS1BP7-201ENST00000522230 235 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP4O75161 AL355836.1-201ENST00000555951 870 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 AC023158.1-201ENST00000561632 1025 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 AC069234.5-201ENST00000611056 416 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP4O75161 CRYM-AS1-204ENST00000637983 556 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP4O75161 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP4O75161 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP4O75161 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP4O75161 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP4O75161 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.38□□□□□ -1.87
NPHP4O75161 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHP4O75161 AC011460.1-201ENST00000636268 1834 ntBASIC3.38□□□□□ -1.87
NPHP4O75161 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
NPHP4O75161 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHP4O75161 RNU6-14P-201ENST00000384630 106 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 SNORA80E-201ENST00000384744 137 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP4O75161 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHP4O75161 AC093151.1-201ENST00000427711 313 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP4O75161 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHP4O75161 AL024509.2-201ENST00000493462 493 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP4O75161 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP4O75161 SNORD116-26-201ENST00000516006 96 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 SCARNA17.1-201ENST00000516211 143 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 SCARNA17.2-201ENST00000516334 143 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHP4O75161 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP4O75161 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NPHP4O75161 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.37□□□□□ -1.87
NPHP4O75161 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms